6zu9

Electron Microscopy
6.2Å resolution

Structure of a yeast ABCE1-bound 48S initiation complex

Released:

Function and Biology Details

Structure analysis Details

Assembly composition:
hetero 44-mer (preferred)
PDBe Complex ID:
PDB-CPX-126843 (preferred)
Entry contents:
41 distinct polypeptide molecules
3 distinct RNA molecules
Macromolecules (44 distinct):
Small ribosomal subunit protein uS2A Chain: P
Molecule details ›
Chain: P
Length: 252 amino acids
Theoretical weight: 28.05 KDa
Source organism: Saccharomyces cerevisiae S288C
UniProt:
  • Canonical: P32905 (Residues: 1-252; Coverage: 100%)
Gene names: NAB1, NAB1A, RPS0A, YGR214W, YST1
Sequence domains: Ribosomal protein S2
Small ribosomal subunit protein eS1A Chain: Q
Molecule details ›
Chain: Q
Length: 255 amino acids
Theoretical weight: 28.8 KDa
Source organism: Saccharomyces cerevisiae S288C
UniProt:
  • Canonical: P33442 (Residues: 1-255; Coverage: 100%)
Gene names: L9753.9, PLC1, RPS10A, RPS1A, YLR441C
Sequence domains: Ribosomal S3Ae family
Small ribosomal subunit protein uS5 Chain: R
Small ribosomal subunit protein eS4A Chain: S
Small ribosomal subunit protein eS6A Chain: T
Small ribosomal subunit protein eS7A Chain: U
Small ribosomal subunit protein eS8A Chain: V
Small ribosomal subunit protein uS4A Chain: W
Small ribosomal subunit protein uS17A Chain: X
Small ribosomal subunit protein uS15 Chain: Y
Small ribosomal subunit protein uS11A Chain: Z
Small ribosomal subunit protein eS21A Chain: a
Small ribosomal subunit protein uS8A Chain: b
Small ribosomal subunit protein uS12A Chain: c
Small ribosomal subunit protein eS24A Chain: d
Small ribosomal subunit protein eS26A Chain: e
Small ribosomal subunit protein eS27A Chain: f
Small ribosomal subunit protein eS30A Chain: g
Small ribosomal subunit protein uS19 Chain: E
Small ribosomal subunit protein uS3 Chain: B
Small ribosomal subunit protein uS7 Chain: C
Small ribosomal subunit protein eS10A Chain: D
Small ribosomal subunit protein eS12 Chain: F
Small ribosomal subunit protein uS9A Chain: H
Small ribosomal subunit protein eS17A Chain: I
Small ribosomal subunit protein uS13A Chain: J
Small ribosomal subunit protein eS19A Chain: K
Small ribosomal subunit protein uS10 Chain: L
Small ribosomal subunit protein eS25A Chain: M
Small ribosomal subunit protein uS14A Chain: N
Ubiquitin-ribosomal protein eS31 fusion protein Chain: O
Small ribosomal subunit protein RACK1 Chain: h
Small ribosomal subunit protein eS28B Chain: i
Eukaryotic translation initiation factor 3 subunit I Chain: l
Eukaryotic translation initiation factor 3 subunit G Chain: r
Eukaryotic translation initiation factor 5 Chain: m
Eukaryotic translation initiation factor 3 subunit A Chain: o
Eukaryotic translation initiation factor 3 subunit B Chain: p
Eukaryotic translation initiation factor 3 subunit C Chain: q
Eukaryotic translation initiation factor 1A Chain: A
Translation initiation factor RLI1 Chain: k
18S Ribosomal RNA Chain: 2
tRNA Chain: 1
Messenger RNA Chain: 3

Ligands and Environments

Experiments and Validation Details

Entry percentile scores
Resolution: 6.2Å
Relevant EMDB volumes: EMD-11439