7zod

Electron Microscopy
2.56Å resolution

70S E. coli ribosome with an extended uL23 loop from Candidatus marinimicrobia

Released:

Function and Biology Details

Structure analysis Details

Assembly composition:
hetero 31-mer (preferred)
PDBe Complex ID:
PDB-CPX-104576 (preferred)
Entry contents:
28 distinct polypeptide molecules
3 distinct RNA molecules
Macromolecules (31 distinct):
Large ribosomal subunit protein bL28 Chain: 0
Molecule details ›
Chain: 0
Length: 78 amino acids
Theoretical weight: 9.03 KDa
Source organism: Escherichia coli
UniProt:
  • Canonical: P0A7M2 (Residues: 1-78; Coverage: 100%)
Gene names: JW3612, b3637, rpmB
Sequence domains: Ribosomal L28 family
Large ribosomal subunit protein uL29 Chain: 1
Molecule details ›
Chain: 1
Length: 63 amino acids
Theoretical weight: 7.29 KDa
Source organism: Escherichia coli
UniProt:
  • Canonical: P0A7M6 (Residues: 1-63; Coverage: 100%)
Gene names: JW3274, b3312, rpmC
Sequence domains: Ribosomal L29 protein
Large ribosomal subunit protein uL30 Chain: 2
Large ribosomal subunit protein bL32 Chain: 3
Large ribosomal subunit protein bL33 Chain: 4
Large ribosomal subunit protein bL34 Chain: 6
Large ribosomal subunit protein bL35 Chain: 7
Large ribosomal subunit protein bL36 Chain: 8
Large ribosomal subunit protein uL2 Chain: c
Large ribosomal subunit protein uL3 Chain: d
Large ribosomal subunit protein uL4 Chain: e
Large ribosomal subunit protein uL5 Chain: f
Large ribosomal subunit protein uL6 Chain: g
Large ribosomal subunit protein bL9 Chain: h
Large ribosomal subunit protein uL13 Chain: j
Large ribosomal subunit protein uL14 Chain: k
Large ribosomal subunit protein uL15 Chain: l
Large ribosomal subunit protein uL16 Chain: m
Large ribosomal subunit protein bL17 Chain: n
Large ribosomal subunit protein uL18 Chain: o
Large ribosomal subunit protein bL19 Chain: p
Large ribosomal subunit protein bL20 Chain: q
Large ribosomal subunit protein bL21 Chain: r
Large ribosomal subunit protein uL22 Chain: s
Large ribosomal subunit protein uL23 Chain: t
Large ribosomal subunit protein uL24 Chain: u
Large ribosomal subunit protein bL25 Chain: w
Large ribosomal subunit protein bL27 Chain: y
5S ribosomal RNA Chain: a
23S ribosomal RNA Chain: b
Pro-tRNA Chain: v

Ligands and Environments

No bound ligands
No modified residues

Experiments and Validation Details

Entry percentile scores
Resolution: 2.56Å
Relevant EMDB volumes: EMD-14846