data_5K2H # _entry.id 5K2H # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country US _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'Proc. Natl. Acad. Sci. U.S.A.' _citation.journal_id_ASTM PNASA6 _citation.journal_id_CSD 0040 _citation.journal_id_ISSN 1091-6490 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 113 _citation.language ? _citation.page_first 11232 _citation.page_last 11236 _citation.title 'Ab initio structure determination from prion nanocrystals at atomic resolution by MicroED.' _citation.year 2016 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1073/pnas.1606287113 _citation.pdbx_database_id_PubMed 27647903 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Sawaya, M.R.' 1 ? primary 'Rodriguez, J.' 2 ? primary 'Cascio, D.' 3 ? primary 'Collazo, M.J.' 4 ? primary 'Shi, D.' 5 ? primary 'Reyes, F.E.' 6 ? primary 'Hattne, J.' 7 ? primary 'Gonen, T.' 8 ? primary 'Eisenberg, D.S.' 9 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn 'Eukaryotic peptide chain release factor GTP-binding subunit' 836.807 1 ? ? 'UNP residues 7-13' ? 2 water nat water 18.015 6 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name ;SUP35, ERF-3, ERF3, ERF2, G1 to S phase transition protein 1, Omnipotent suppressor protein 2, PSI no more protein 2, Polypeptide release factor 3, Translation release factor 3 ; # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code GNNQQNY _entity_poly.pdbx_seq_one_letter_code_can GNNQQNY _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 ASN n 1 3 ASN n 1 4 GLN n 1 5 GLN n 1 6 ASN n 1 7 TYR n # _pdbx_entity_src_syn.entity_id 1 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num 1 _pdbx_entity_src_syn.pdbx_end_seq_num 7 _pdbx_entity_src_syn.organism_scientific 'Saccharomyces cerevisiae' _pdbx_entity_src_syn.organism_common_name ;Baker's yeast ; _pdbx_entity_src_syn.ncbi_taxonomy_id 4932 _pdbx_entity_src_syn.details ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HOH non-polymer . WATER ? 'H2 O' 18.015 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 1 1 GLY GLY A . n A 1 2 ASN 2 2 2 ASN ASN A . n A 1 3 ASN 3 3 3 ASN ASN A . n A 1 4 GLN 4 4 4 GLN GLN A . n A 1 5 GLN 5 5 5 GLN GLN A . n A 1 6 ASN 6 6 6 ASN ASN A . n A 1 7 TYR 7 7 7 TYR TYR A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 HOH 1 101 5 HOH HOH A . B 2 HOH 2 102 6 HOH HOH A . B 2 HOH 3 103 2 HOH HOH A . B 2 HOH 4 104 4 HOH HOH A . B 2 HOH 5 105 1 HOH HOH A . B 2 HOH 6 106 3 HOH HOH A . # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? 'data scaling' ? ? 'Wolfgang Kabsch' ? ? ? ? ? ? 'http://www.mpimf-heidelberg.mpg.de/~kabsch/xds/html_doc/xscale_program.html' ? XSCALE ? ? package . 1 ? refinement ? ? 'Garib N. Murshudov' garib@ysbl.york.ac.uk ? ? ? ? 'Fortran_77' http://www.ccp4.ac.uk/dist/html/refmac5.html ? REFMAC ? ? program . 2 ? 'data extraction' ? ? PDB deposit@deposit.rcsb.org 'June. 20, 2015' ? ? ? C++ 'http://sw-tools.pdb.org/apps/PDB_EXTRACT/' ? 'PDB_EXTRACT' ? ? package 3.20 3 # _cell.angle_alpha 90.000 _cell.angle_alpha_esd ? _cell.angle_beta 90.000 _cell.angle_beta_esd ? _cell.angle_gamma 90.000 _cell.angle_gamma_esd ? _cell.entry_id 5K2H _cell.details ? _cell.formula_units_Z ? _cell.length_a 23.160 _cell.length_a_esd ? _cell.length_b 4.930 _cell.length_b_esd ? _cell.length_c 40.510 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 4 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 5K2H _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 5K2H _exptl.crystals_number ? _exptl.details ? _exptl.method 'Electron crystallography' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews ? _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol ? _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method BATCH _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 7.0 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 273 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details water _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? _diffrn.pdbx_serial_crystal_experiment ? # _diffrn_detector.details ? _diffrn_detector.detector CMOS _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'TVIPS F416 CMOS CAMERA' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2016-02-03 # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.0251 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source 'Electron microscope' _diffrn_source.target ? _diffrn_source.type 'TECNAI F20 TEM' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.0251 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline ? _diffrn_source.pdbx_synchrotron_site ? # _reflns.B_iso_Wilson_estimate 8.654 _reflns.entry_id 5K2H _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 1.050 _reflns.d_resolution_low 20.11 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 1836 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I -3.000 _reflns.percent_possible_obs 72.700 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy ? _reflns.pdbx_Rmerge_I_obs 0.189 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 4.180 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared 0.869 _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all 0.218 _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all 6795 _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half 0.992 _reflns.pdbx_R_split ? # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.meanI_over_sigI_all _reflns_shell.meanI_over_sigI_obs _reflns_shell.number_measured_all _reflns_shell.number_measured_obs _reflns_shell.number_possible _reflns_shell.number_unique_all _reflns_shell.number_unique_obs _reflns_shell.percent_possible_all _reflns_shell.percent_possible_obs _reflns_shell.Rmerge_F_all _reflns_shell.Rmerge_F_obs _reflns_shell.Rmerge_I_all _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_gt _reflns_shell.meanI_over_uI_all _reflns_shell.meanI_over_uI_gt _reflns_shell.number_measured_gt _reflns_shell.number_unique_gt _reflns_shell.percent_possible_gt _reflns_shell.Rmerge_F_gt _reflns_shell.Rmerge_I_gt _reflns_shell.pdbx_redundancy _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_netI_over_sigmaI_all _reflns_shell.pdbx_netI_over_sigmaI_obs _reflns_shell.pdbx_Rrim_I_all _reflns_shell.pdbx_Rpim_I_all _reflns_shell.pdbx_rejects _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id _reflns_shell.pdbx_CC_half _reflns_shell.pdbx_R_split 1.050 1.190 ? 2.260 ? 2204 762 ? 572 75.100 ? ? ? ? 0.438 ? ? ? ? ? ? ? ? ? ? ? ? ? 0.497 ? 0 1 1 0.813 ? 1.190 1.360 ? 3.050 ? 1437 541 ? 396 73.200 ? ? ? ? 0.336 ? ? ? ? ? ? ? ? ? ? ? ? ? 0.383 ? 0 2 1 0.875 ? 1.360 1.710 ? 4.520 ? 1674 590 ? 441 74.700 ? ? ? ? 0.252 ? ? ? ? ? ? ? ? ? ? ? ? ? 0.288 ? 0 3 1 0.899 ? 1.710 ? ? 7.470 ? 1480 633 ? 427 67.500 ? ? ? ? 0.116 ? ? ? ? ? ? ? ? ? ? ? ? ? 0.137 ? 0 4 1 0.993 ? # _refine.aniso_B[1][1] 0.4000 _refine.aniso_B[1][2] 0.0000 _refine.aniso_B[1][3] -0.0000 _refine.aniso_B[2][2] -0.4200 _refine.aniso_B[2][3] 0.0000 _refine.aniso_B[3][3] 0.0200 _refine.B_iso_max 18.760 _refine.B_iso_mean 4.7050 _refine.B_iso_min 2.080 _refine.correlation_coeff_Fo_to_Fc 0.9660 _refine.correlation_coeff_Fo_to_Fc_free 0.9790 _refine.details 'HYDROGENS HAVE BEEN USED IF PRESENT IN THE INPUT' _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 5K2H _refine.pdbx_refine_id 'Electron crystallography' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 1.0500 _refine.ls_d_res_low 20.1100 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 1653 _refine.ls_number_reflns_R_free 184 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 72.7500 _refine.ls_percent_reflns_R_free 10.0000 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.1781 _refine.ls_R_factor_R_free 0.1856 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.1772 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.000 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_method_to_determine_struct ? _refine.pdbx_starting_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R 0.0460 _refine.pdbx_overall_ESU_R_Free 0.0440 _refine.pdbx_solvent_vdw_probe_radii 1.2000 _refine.pdbx_solvent_ion_probe_radii 0.8000 _refine.pdbx_solvent_shrinkage_radii 0.8000 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B 0.6130 _refine.overall_SU_ML 0.0300 _refine.overall_SU_R_Cruickshank_DPI 0.0463 _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.cycle_id final _refine_hist.pdbx_refine_id 'X-ray diffraction' _refine_hist.d_res_high 1.0500 _refine_hist.d_res_low 20.1100 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 6 _refine_hist.number_atoms_total 65 _refine_hist.pdbx_number_residues_total 7 _refine_hist.pdbx_B_iso_mean_solvent 14.47 _refine_hist.pdbx_number_atoms_protein 59 _refine_hist.pdbx_number_atoms_nucleic_acid 0 # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'Electron crystallography' ? 0.017 0.020 59 ? 'r_bond_refined_d' ? ? 'Electron crystallography' ? 0.001 0.020 48 ? 'r_bond_other_d' ? ? 'Electron crystallography' ? 1.592 1.857 79 ? 'r_angle_refined_deg' ? ? 'Electron crystallography' ? 0.747 3.000 105 ? 'r_angle_other_deg' ? ? 'Electron crystallography' ? 5.988 5.000 6 ? 'r_dihedral_angle_1_deg' ? ? 'Electron crystallography' ? 56.662 28.333 6 ? 'r_dihedral_angle_2_deg' ? ? 'Electron crystallography' ? 8.289 15.000 8 ? 'r_dihedral_angle_3_deg' ? ? 'Electron crystallography' ? 0.113 0.200 6 ? 'r_chiral_restr' ? ? 'Electron crystallography' ? 0.010 0.020 84 ? 'r_gen_planes_refined' ? ? 'Electron crystallography' ? 0.001 0.020 20 ? 'r_gen_planes_other' ? ? 'Electron crystallography' ? 0.710 0.343 27 ? 'r_mcbond_it' ? ? 'Electron crystallography' ? 0.581 0.325 26 ? 'r_mcbond_other' ? ? 'Electron crystallography' ? 1.117 0.494 32 ? 'r_mcangle_it' ? ? # _refine_ls_shell.pdbx_refine_id 'Electron crystallography' _refine_ls_shell.d_res_high 1.0500 _refine_ls_shell.d_res_low 1.0770 _refine_ls_shell.number_reflns_all 125 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.number_reflns_R_free 12 _refine_ls_shell.number_reflns_R_work 113 _refine_ls_shell.percent_reflns_obs 74.4000 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_obs ? _refine_ls_shell.R_factor_R_free 0.2590 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.R_factor_R_work 0.3020 _refine_ls_shell.redundancy_reflns_all ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.wR_factor_all ? _refine_ls_shell.wR_factor_obs ? _refine_ls_shell.wR_factor_R_free ? _refine_ls_shell.wR_factor_R_work ? _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.pdbx_phase_error ? _refine_ls_shell.pdbx_fsc_work ? _refine_ls_shell.pdbx_fsc_free ? # _struct.entry_id 5K2H _struct.title 'Structure of GNNQQNY from yeast prion Sup35 in space group P212121 determined by MicroED' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 5K2H _struct_keywords.text 'amyloid, yeast prion, PROTEIN FIBRIL' _struct_keywords.pdbx_keywords 'PROTEIN FIBRIL' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code ERF3_YEAST _struct_ref.pdbx_db_accession P05453 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code GNNQQNY _struct_ref.pdbx_align_begin 7 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 5K2H _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 7 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P05453 _struct_ref_seq.db_align_beg 7 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 13 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 7 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details octadecameric _pdbx_struct_assembly.oligomeric_count 18 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,B 1 2 A,B 1 3 A,B 1 4 A,B 1 5 A,B 1 6 A,B 1 7 A,B 1 8 A,B 1 9 A,B 1 10 A,B 1 11 A,B 1 12 A,B 1 13 A,B 1 14 A,B 1 15 A,B 1 16 A,B 1 17 A,B 1 18 A,B # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 1_515 x,y-4,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 -19.7200000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 3 'crystal symmetry operation' 1_525 x,y-3,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 -14.7900000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 4 'crystal symmetry operation' 1_535 x,y-2,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 -9.8600000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 5 'crystal symmetry operation' 1_545 x,y-1,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 -4.9300000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 6 'crystal symmetry operation' 1_565 x,y+1,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 4.9300000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 7 'crystal symmetry operation' 1_575 x,y+2,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 9.8600000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 8 'crystal symmetry operation' 1_585 x,y+3,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 14.7900000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 9 'crystal symmetry operation' 1_595 x,y+4,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 19.7200000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 10 'crystal symmetry operation' 3_615 -x+1,y-7/2,-z+1/2 -1.0000000000 0.0000000000 0.0000000000 23.1600000000 0.0000000000 1.0000000000 0.0000000000 -17.2550000000 0.0000000000 0.0000000000 -1.0000000000 20.2550000000 11 'crystal symmetry operation' 3_625 -x+1,y-5/2,-z+1/2 -1.0000000000 0.0000000000 0.0000000000 23.1600000000 0.0000000000 1.0000000000 0.0000000000 -12.3250000000 0.0000000000 0.0000000000 -1.0000000000 20.2550000000 12 'crystal symmetry operation' 3_635 -x+1,y-3/2,-z+1/2 -1.0000000000 0.0000000000 0.0000000000 23.1600000000 0.0000000000 1.0000000000 0.0000000000 -7.3950000000 0.0000000000 0.0000000000 -1.0000000000 20.2550000000 13 'crystal symmetry operation' 3_645 -x+1,y-1/2,-z+1/2 -1.0000000000 0.0000000000 0.0000000000 23.1600000000 0.0000000000 1.0000000000 0.0000000000 -2.4650000000 0.0000000000 0.0000000000 -1.0000000000 20.2550000000 14 'crystal symmetry operation' 3_655 -x+1,y+1/2,-z+1/2 -1.0000000000 0.0000000000 0.0000000000 23.1600000000 0.0000000000 1.0000000000 0.0000000000 2.4650000000 0.0000000000 0.0000000000 -1.0000000000 20.2550000000 15 'crystal symmetry operation' 3_665 -x+1,y+3/2,-z+1/2 -1.0000000000 0.0000000000 0.0000000000 23.1600000000 0.0000000000 1.0000000000 0.0000000000 7.3950000000 0.0000000000 0.0000000000 -1.0000000000 20.2550000000 16 'crystal symmetry operation' 3_675 -x+1,y+5/2,-z+1/2 -1.0000000000 0.0000000000 0.0000000000 23.1600000000 0.0000000000 1.0000000000 0.0000000000 12.3250000000 0.0000000000 0.0000000000 -1.0000000000 20.2550000000 17 'crystal symmetry operation' 3_685 -x+1,y+7/2,-z+1/2 -1.0000000000 0.0000000000 0.0000000000 23.1600000000 0.0000000000 1.0000000000 0.0000000000 17.2550000000 0.0000000000 0.0000000000 -1.0000000000 20.2550000000 18 'crystal symmetry operation' 3_695 -x+1,y+9/2,-z+1/2 -1.0000000000 0.0000000000 0.0000000000 23.1600000000 0.0000000000 1.0000000000 0.0000000000 22.1850000000 0.0000000000 0.0000000000 -1.0000000000 20.2550000000 # _struct_biol.id 1 _struct_biol.details ;The biological unit is an extended pair of beta sheets comprising peptides at positions X,Y,Z and 1-X,1/2+Y,1/2-Z extended ad infinitum along the b crystal axis. ; # _em_3d_fitting.entry_id 5K2H _em_3d_fitting.id 1 _em_3d_fitting.details ? _em_3d_fitting.overall_b_value 4.7 _em_3d_fitting.ref_protocol OTHER _em_3d_fitting.ref_space RECIPROCAL _em_3d_fitting.target_criteria 'maximum likelihood' _em_3d_fitting.method ? # _em_3d_reconstruction.entry_id 5K2H _em_3d_reconstruction.id 1 _em_3d_reconstruction.algorithm ? _em_3d_reconstruction.details ;The density map was obtained using measured diffraction intensities and phases acquired from crystallographic direct methods program SHELXD. ; _em_3d_reconstruction.image_processing_id 1 _em_3d_reconstruction.num_class_averages ? _em_3d_reconstruction.num_particles ? _em_3d_reconstruction.resolution ? _em_3d_reconstruction.resolution_method 'DIFFRACTION PATTERN/LAYERLINES' _em_3d_reconstruction.symmetry_type '3D CRYSTAL' _em_3d_reconstruction.method ? _em_3d_reconstruction.nominal_pixel_size ? _em_3d_reconstruction.actual_pixel_size ? _em_3d_reconstruction.magnification_calibration ? _em_3d_reconstruction.citation_id ? _em_3d_reconstruction.euler_angles_details ? # _em_buffer.id 1 _em_buffer.details water _em_buffer.pH 7 _em_buffer.specimen_id 1 _em_buffer.name ? # _em_entity_assembly.id 1 _em_entity_assembly.parent_id 0 _em_entity_assembly.details ? _em_entity_assembly.name 'Prion fibril composed of a 7-residue segment of Sup35' _em_entity_assembly.source 'MULTIPLE SOURCES' _em_entity_assembly.type COMPLEX _em_entity_assembly.entity_id_list 1 _em_entity_assembly.synonym ? _em_entity_assembly.oligomeric_details ? # _em_image_scans.entry_id 5K2H _em_image_scans.id 1 _em_image_scans.dimension_height 4096 _em_image_scans.dimension_width 4096 _em_image_scans.frames_per_image ? _em_image_scans.image_recording_id 1 _em_image_scans.sampling_size 15.6 _em_image_scans.scanner_model ? _em_image_scans.used_frames_per_image ? _em_image_scans.number_digital_images ? _em_image_scans.details ? _em_image_scans.od_range ? _em_image_scans.quant_bit_size ? _em_image_scans.citation_id ? # _em_imaging.id 1 _em_imaging.entry_id 5K2H _em_imaging.accelerating_voltage 200 _em_imaging.alignment_procedure BASIC _em_imaging.c2_aperture_diameter ? _em_imaging.calibrated_defocus_max ? _em_imaging.calibrated_defocus_min ? _em_imaging.calibrated_magnification ? _em_imaging.cryogen NITROGEN _em_imaging.details ? _em_imaging.electron_source 'FIELD EMISSION GUN' _em_imaging.illumination_mode 'FLOOD BEAM' _em_imaging.microscope_model 'FEI TECNAI F20' _em_imaging.mode DIFFRACTION _em_imaging.nominal_cs ? _em_imaging.nominal_defocus_max ? _em_imaging.nominal_defocus_min ? _em_imaging.nominal_magnification ? _em_imaging.recording_temperature_maximum 100 _em_imaging.recording_temperature_minimum 100 _em_imaging.residual_tilt ? _em_imaging.specimen_holder_model 'GATAN 626 SINGLE TILT LIQUID NITROGEN CRYO TRANSFER HOLDER' _em_imaging.specimen_id 1 _em_imaging.date ? _em_imaging.temperature ? _em_imaging.tilt_angle_min ? _em_imaging.tilt_angle_max ? _em_imaging.specimen_holder_type ? _em_imaging.astigmatism ? _em_imaging.electron_beam_tilt_params ? _em_imaging.citation_id ? _em_imaging.detector_distance ? # _em_sample_support.id 1 _em_sample_support.specimen_id 1 _em_sample_support.details ? _em_sample_support.grid_material COPPER _em_sample_support.grid_mesh_size 300 _em_sample_support.grid_type 'Quantifoil R2/2' _em_sample_support.method ? _em_sample_support.film_material ? _em_sample_support.citation_id ? # _em_vitrification.id 1 _em_vitrification.specimen_id 1 _em_vitrification.chamber_temperature ? _em_vitrification.cryogen_name ETHANE _em_vitrification.details 'Plunged into liquid ethane (FEI VITROBOT MARK IV)' _em_vitrification.humidity ? _em_vitrification.instrument 'FEI VITROBOT MARK IV' _em_vitrification.entry_id 5K2H _em_vitrification.temp ? _em_vitrification.method ? _em_vitrification.time_resolved_state ? _em_vitrification.citation_id ? # _em_experiment.entry_id 5K2H _em_experiment.id 1 _em_experiment.aggregation_state '3D ARRAY' _em_experiment.reconstruction_method CRYSTALLOGRAPHY _em_experiment.entity_assembly_id 1 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ASN N N N N 1 ASN CA C N S 2 ASN C C N N 3 ASN O O N N 4 ASN CB C N N 5 ASN CG C N N 6 ASN OD1 O N N 7 ASN ND2 N N N 8 ASN OXT O N N 9 ASN H H N N 10 ASN H2 H N N 11 ASN HA H N N 12 ASN HB2 H N N 13 ASN HB3 H N N 14 ASN HD21 H N N 15 ASN HD22 H N N 16 ASN HXT H N N 17 GLN N N N N 18 GLN CA C N S 19 GLN C C N N 20 GLN O O N N 21 GLN CB C N N 22 GLN CG C N N 23 GLN CD C N N 24 GLN OE1 O N N 25 GLN NE2 N N N 26 GLN OXT O N N 27 GLN H H N N 28 GLN H2 H N N 29 GLN HA H N N 30 GLN HB2 H N N 31 GLN HB3 H N N 32 GLN HG2 H N N 33 GLN HG3 H N N 34 GLN HE21 H N N 35 GLN HE22 H N N 36 GLN HXT H N N 37 GLY N N N N 38 GLY CA C N N 39 GLY C C N N 40 GLY O O N N 41 GLY OXT O N N 42 GLY H H N N 43 GLY H2 H N N 44 GLY HA2 H N N 45 GLY HA3 H N N 46 GLY HXT H N N 47 HOH O O N N 48 HOH H1 H N N 49 HOH H2 H N N 50 TYR N N N N 51 TYR CA C N S 52 TYR C C N N 53 TYR O O N N 54 TYR CB C N N 55 TYR CG C Y N 56 TYR CD1 C Y N 57 TYR CD2 C Y N 58 TYR CE1 C Y N 59 TYR CE2 C Y N 60 TYR CZ C Y N 61 TYR OH O N N 62 TYR OXT O N N 63 TYR H H N N 64 TYR H2 H N N 65 TYR HA H N N 66 TYR HB2 H N N 67 TYR HB3 H N N 68 TYR HD1 H N N 69 TYR HD2 H N N 70 TYR HE1 H N N 71 TYR HE2 H N N 72 TYR HH H N N 73 TYR HXT H N N 74 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ASN N CA SING N N 1 ASN N H SING N N 2 ASN N H2 SING N N 3 ASN CA C SING N N 4 ASN CA CB SING N N 5 ASN CA HA SING N N 6 ASN C O DOUB N N 7 ASN C OXT SING N N 8 ASN CB CG SING N N 9 ASN CB HB2 SING N N 10 ASN CB HB3 SING N N 11 ASN CG OD1 DOUB N N 12 ASN CG ND2 SING N N 13 ASN ND2 HD21 SING N N 14 ASN ND2 HD22 SING N N 15 ASN OXT HXT SING N N 16 GLN N CA SING N N 1 GLN N H SING N N 2 GLN N H2 SING N N 3 GLN CA C SING N N 4 GLN CA CB SING N N 5 GLN CA HA SING N N 6 GLN C O DOUB N N 7 GLN C OXT SING N N 8 GLN CB CG SING N N 9 GLN CB HB2 SING N N 10 GLN CB HB3 SING N N 11 GLN CG CD SING N N 12 GLN CG HG2 SING N N 13 GLN CG HG3 SING N N 14 GLN CD OE1 DOUB N N 15 GLN CD NE2 SING N N 16 GLN NE2 HE21 SING N N 17 GLN NE2 HE22 SING N N 18 GLN OXT HXT SING N N 19 GLY N CA SING N N 1 GLY N H SING N N 2 GLY N H2 SING N N 3 GLY CA C SING N N 4 GLY CA HA2 SING N N 5 GLY CA HA3 SING N N 6 GLY C O DOUB N N 7 GLY C OXT SING N N 8 GLY OXT HXT SING N N 9 HOH O H1 SING N N 1 HOH O H2 SING N N 2 TYR N CA SING N N 1 TYR N H SING N N 2 TYR N H2 SING N N 3 TYR CA C SING N N 4 TYR CA CB SING N N 5 TYR CA HA SING N N 6 TYR C O DOUB N N 7 TYR C OXT SING N N 8 TYR CB CG SING N N 9 TYR CB HB2 SING N N 10 TYR CB HB3 SING N N 11 TYR CG CD1 DOUB Y N 12 TYR CG CD2 SING Y N 13 TYR CD1 CE1 SING Y N 14 TYR CD1 HD1 SING N N 15 TYR CD2 CE2 DOUB Y N 16 TYR CD2 HD2 SING N N 17 TYR CE1 CZ DOUB Y N 18 TYR CE1 HE1 SING N N 19 TYR CE2 CZ SING Y N 20 TYR CE2 HE2 SING N N 21 TYR CZ OH SING N N 22 TYR OH HH SING N N 23 TYR OXT HXT SING N N 24 # _em_3d_crystal_entity.id 1 _em_3d_crystal_entity.image_processing_id 1 _em_3d_crystal_entity.angle_alpha 90.00 _em_3d_crystal_entity.angle_beta 90.00 _em_3d_crystal_entity.angle_gamma 90.00 _em_3d_crystal_entity.length_a 23.160 _em_3d_crystal_entity.length_b 4.930 _em_3d_crystal_entity.length_c 40.510 _em_3d_crystal_entity.space_group_name 'P 21 21 21' _em_3d_crystal_entity.space_group_num 19 # _em_crystal_formation.id 1 _em_crystal_formation.specimen_id 1 _em_crystal_formation.atmosphere 'in air, in sealed chamber, in equilibrium with reservoir solution' _em_crystal_formation.details 'Grown in batch at ~20 degrees C in a microcentrifuge tube. Crystals grew within a day after seeding with NNQQNY-Zn crystals.' _em_crystal_formation.instrument '24-well plate' _em_crystal_formation.lipid_mixture none _em_crystal_formation.lipid_protein_ratio ? _em_crystal_formation.temperature 298 _em_crystal_formation.time 1 _em_crystal_formation.time_unit DAY # _em_ctf_correction.id 1 _em_ctf_correction.em_image_processing_id 1 _em_ctf_correction.type NONE _em_ctf_correction.details ? # _em_diffraction.id 1 _em_diffraction.camera_length 1350 _em_diffraction.imaging_id 1 _em_diffraction.tilt_angle_list ? # loop_ _em_diffraction_shell.id _em_diffraction_shell.em_diffraction_stats_id _em_diffraction_shell.fourier_space_coverage _em_diffraction_shell.high_resolution _em_diffraction_shell.low_resolution _em_diffraction_shell.multiplicity _em_diffraction_shell.num_structure_factors _em_diffraction_shell.phase_residual 1 1 67.5 1.71 90 3.5 427 0.1 2 1 74.7 1.36 1.71 3.8 441 0.1 3 1 73.2 1.19 1.36 3.6 396 0.1 4 1 75.1 1.05 1.19 3.9 572 0.1 5 1 72.7 1.05 90 3.7 1836 0.1 # _em_diffraction_stats.id 1 _em_diffraction_stats.details ;Phase statistics are not applicable. No imaging was used. The phases were obtained by a crystallographic direct methods program, SHELXD. ; _em_diffraction_stats.image_processing_id 1 _em_diffraction_stats.fourier_space_coverage 82.7 _em_diffraction_stats.high_resolution 1.00 _em_diffraction_stats.num_intensities_measured 16753 _em_diffraction_stats.num_structure_factors 2399 _em_diffraction_stats.overall_phase_error 0.1 _em_diffraction_stats.overall_phase_residual 0.1 _em_diffraction_stats.phase_error_rejection_criteria 0 _em_diffraction_stats.r_merge 15.1 _em_diffraction_stats.r_sym 15.1 # _em_entity_assembly_molwt.entity_assembly_id 1 _em_entity_assembly_molwt.id 1 _em_entity_assembly_molwt.experimental_flag NO _em_entity_assembly_molwt.units KILODALTONS/NANOMETER _em_entity_assembly_molwt.value 3.25 # _em_entity_assembly_naturalsource.id 1 _em_entity_assembly_naturalsource.entity_assembly_id 1 _em_entity_assembly_naturalsource.cell ? _em_entity_assembly_naturalsource.cellular_location ? _em_entity_assembly_naturalsource.ncbi_tax_id 4932 _em_entity_assembly_naturalsource.organ . _em_entity_assembly_naturalsource.organelle ? _em_entity_assembly_naturalsource.organism 'Saccharomyces cerevisiae' _em_entity_assembly_naturalsource.strain ? _em_entity_assembly_naturalsource.tissue . # _em_image_processing.id 1 _em_image_processing.image_recording_id 1 _em_image_processing.details ? # _em_image_recording.id 1 _em_image_recording.imaging_id 1 _em_image_recording.avg_electron_dose_per_image 0.01 _em_image_recording.average_exposure_time 2 _em_image_recording.details 'The detector was operated in rolling shutter mode with 2x2 pixel binning.' _em_image_recording.detector_mode ? _em_image_recording.film_or_detector_model 'TVIPS TEMCAM-F416 (4k x 4k)' _em_image_recording.num_diffraction_images 127 _em_image_recording.num_grids_imaged 2 _em_image_recording.num_real_images ? # _em_imaging_optics.id 1 _em_imaging_optics.imaging_id 1 _em_imaging_optics.chr_aberration_corrector ? _em_imaging_optics.energyfilter_lower ? _em_imaging_optics.energyfilter_name none _em_imaging_optics.energyfilter_upper ? _em_imaging_optics.phase_plate ? _em_imaging_optics.sph_aberration_corrector ? # loop_ _em_software.id _em_software.category _em_software.details _em_software.name _em_software.version _em_software.image_processing_id _em_software.fitting_id _em_software.imaging_id 1 'IMAGE ACQUISITION' ? EM-Menu 1 ? ? 1 2 MASKING ? ? ? ? ? ? 3 'CTF CORRECTION' ? ? ? 1 ? ? 4 'LAYERLINE INDEXING' ? ? ? ? ? ? 5 'DIFFRACTION INDEXING' ? XDS 'Oct 15, 2015' ? ? ? 6 'MODEL FITTING' ? Coot 0.8.2 ? 1 ? 7 OTHER phasing SHELXD 2013/2 ? ? ? 8 'MODEL REFINEMENT' ? refmac5 5.8.0135 ? 1 ? 9 'MOLECULAR REPLACEMENT' ? ? ? 1 ? ? 10 'SYMMETRY DETERMINATION' ? ? ? 1 ? ? 11 'CRYSTALLOGRAPHY MERGING' ? SCALEPACK 1.98.7 1 ? ? 12 RECONSTRUCTION 'direct methods' SHELXD 2013/2 1 ? ? # _em_specimen.id 1 _em_specimen.experiment_id 1 _em_specimen.concentration 10 _em_specimen.details crystal _em_specimen.embedding_applied NO _em_specimen.shadowing_applied NO _em_specimen.staining_applied NO _em_specimen.vitrification_applied YES # _atom_sites.entry_id 5K2H _atom_sites.fract_transf_matrix[1][1] 0.043178 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] -0.000000 _atom_sites.fract_transf_matrix[2][2] 0.202840 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] -0.000000 _atom_sites.fract_transf_matrix[3][3] 0.024685 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C H N O # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_alt_id _atom_site.label_comp_id _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.label_seq_id _atom_site.pdbx_PDB_ins_code _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_seq_id _atom_site.auth_comp_id _atom_site.auth_asym_id _atom_site.auth_atom_id _atom_site.pdbx_PDB_model_num _atom_site.pdbx_label_index _atom_site.pdbx_sifts_xref_db_name _atom_site.pdbx_sifts_xref_db_acc _atom_site.pdbx_sifts_xref_db_num _atom_site.pdbx_sifts_xref_db_res ATOM 1 N N . GLY A 1 1 ? 1.851 2.547 4.633 1.00 6.62 ? 1 GLY A N 1 1 UNP P05453 7 G ATOM 2 C CA . GLY A 1 1 ? 2.089 2.952 6.067 1.00 5.17 ? 1 GLY A CA 1 1 UNP P05453 7 G ATOM 3 C C . GLY A 1 1 ? 3.158 4.026 6.159 1.00 4.86 ? 1 GLY A C 1 1 UNP P05453 7 G ATOM 4 O O . GLY A 1 1 ? 3.317 4.826 5.225 1.00 5.43 ? 1 GLY A O 1 1 UNP P05453 7 G ATOM 5 H H1 . GLY A 1 1 ? 2.505 1.822 4.375 1.00 6.14 ? 1 GLY A H1 1 1 UNP P05453 7 G ATOM 6 H H2 . GLY A 1 1 ? 0.955 2.213 4.546 1.00 6.14 ? 1 GLY A H2 1 1 UNP P05453 7 G ATOM 7 H H3 . GLY A 1 1 ? 1.964 3.302 4.051 1.00 6.13 ? 1 GLY A H3 1 1 UNP P05453 7 G ATOM 8 H HA2 . GLY A 1 1 ? 1.268 3.297 6.450 1.00 5.41 ? 1 GLY A HA2 1 1 UNP P05453 7 G ATOM 9 H HA3 . GLY A 1 1 ? 2.374 2.181 6.583 1.00 5.40 ? 1 GLY A HA3 1 1 UNP P05453 7 G ATOM 10 N N . ASN A 1 2 ? 3.897 4.067 7.274 1.00 3.26 ? 2 ASN A N 1 2 UNP P05453 8 N ATOM 11 C CA . ASN A 1 2 ? 4.982 5.027 7.440 1.00 2.80 ? 2 ASN A CA 1 2 UNP P05453 8 N ATOM 12 C C . ASN A 1 2 ? 6.238 4.506 6.703 1.00 2.87 ? 2 ASN A C 1 2 UNP P05453 8 N ATOM 13 O O . ASN A 1 2 ? 6.445 3.282 6.639 1.00 3.53 ? 2 ASN A O 1 2 UNP P05453 8 N ATOM 14 C CB . ASN A 1 2 ? 5.258 5.252 8.938 1.00 2.78 ? 2 ASN A CB 1 2 UNP P05453 8 N ATOM 15 C CG . ASN A 1 2 ? 4.036 5.757 9.688 1.00 2.83 ? 2 ASN A CG 1 2 UNP P05453 8 N ATOM 16 O OD1 . ASN A 1 2 ? 3.473 6.818 9.356 1.00 4.02 ? 2 ASN A OD1 1 2 UNP P05453 8 N ATOM 17 N ND2 . ASN A 1 2 ? 3.559 4.944 10.638 1.00 3.47 ? 2 ASN A ND2 1 2 UNP P05453 8 N ATOM 18 H H . ASN A 1 2 ? 3.768 3.440 8.056 1.00 3.46 ? 2 ASN A H 1 2 UNP P05453 8 N ATOM 19 H HA . ASN A 1 2 ? 4.733 5.893 7.055 1.00 2.91 ? 2 ASN A HA 1 2 UNP P05453 8 N ATOM 20 H HB2 . ASN A 1 2 ? 5.545 4.413 9.333 1.00 2.80 ? 2 ASN A HB2 1 2 UNP P05453 8 N ATOM 21 H HB3 . ASN A 1 2 ? 5.959 5.917 9.031 1.00 2.80 ? 2 ASN A HB3 1 2 UNP P05453 8 N ATOM 22 H HD21 . ASN A 1 2 ? 2.591 4.849 10.757 1.00 3.26 ? 2 ASN A HD21 1 2 UNP P05453 8 N ATOM 23 H HD22 . ASN A 1 2 ? 4.174 4.445 11.216 1.00 3.26 ? 2 ASN A HD22 1 2 UNP P05453 8 N ATOM 24 N N . ASN A 1 3 ? 7.091 5.424 6.244 1.00 2.86 ? 3 ASN A N 1 3 UNP P05453 9 N ATOM 25 C CA . ASN A 1 3 ? 8.319 5.130 5.473 1.00 2.44 ? 3 ASN A CA 1 3 UNP P05453 9 N ATOM 26 C C . ASN A 1 3 ? 9.568 5.686 6.168 1.00 2.08 ? 3 ASN A C 1 3 UNP P05453 9 N ATOM 27 O O . ASN A 1 3 ? 9.611 6.909 6.419 1.00 2.12 ? 3 ASN A O 1 3 UNP P05453 9 N ATOM 28 C CB . ASN A 1 3 ? 8.211 5.717 4.030 1.00 2.85 ? 3 ASN A CB 1 3 UNP P05453 9 N ATOM 29 C CG . ASN A 1 3 ? 9.406 5.348 3.160 1.00 3.20 ? 3 ASN A CG 1 3 UNP P05453 9 N ATOM 30 O OD1 . ASN A 1 3 ? 9.678 4.162 3.000 1.00 4.82 ? 3 ASN A OD1 1 3 UNP P05453 9 N ATOM 31 N ND2 . ASN A 1 3 ? 10.160 6.315 2.640 1.00 3.56 ? 3 ASN A ND2 1 3 UNP P05453 9 N ATOM 32 H H . ASN A 1 3 ? 6.961 6.415 6.394 1.00 2.76 ? 3 ASN A H 1 3 UNP P05453 9 N ATOM 33 H HA . ASN A 1 3 ? 8.430 4.161 5.382 1.00 2.52 ? 3 ASN A HA 1 3 UNP P05453 9 N ATOM 34 H HB2 . ASN A 1 3 ? 7.413 5.365 3.606 1.00 2.82 ? 3 ASN A HB2 1 3 UNP P05453 9 N ATOM 35 H HB3 . ASN A 1 3 ? 8.156 6.683 4.086 1.00 2.82 ? 3 ASN A HB3 1 3 UNP P05453 9 N ATOM 36 H HD21 . ASN A 1 3 ? 10.738 6.129 1.874 1.00 3.45 ? 3 ASN A HD21 1 3 UNP P05453 9 N ATOM 37 H HD22 . ASN A 1 3 ? 10.135 7.220 3.021 1.00 3.44 ? 3 ASN A HD22 1 3 UNP P05453 9 N ATOM 38 N N . GLN A 1 4 ? 10.589 4.828 6.397 1.00 2.19 ? 4 GLN A N 1 4 UNP P05453 10 Q ATOM 39 C CA . GLN A 1 4 ? 11.930 5.272 6.813 1.00 2.17 ? 4 GLN A CA 1 4 UNP P05453 10 Q ATOM 40 C C . GLN A 1 4 ? 12.944 4.523 5.926 1.00 2.22 ? 4 GLN A C 1 4 UNP P05453 10 Q ATOM 41 O O . GLN A 1 4 ? 12.934 3.281 5.903 1.00 2.70 ? 4 GLN A O 1 4 UNP P05453 10 Q ATOM 42 C CB . GLN A 1 4 ? 12.237 4.983 8.302 1.00 2.13 ? 4 GLN A CB 1 4 UNP P05453 10 Q ATOM 43 C CG . GLN A 1 4 ? 13.602 5.564 8.782 1.00 2.39 ? 4 GLN A CG 1 4 UNP P05453 10 Q ATOM 44 C CD . GLN A 1 4 ? 14.097 5.012 10.130 1.00 2.32 ? 4 GLN A CD 1 4 UNP P05453 10 Q ATOM 45 O OE1 . GLN A 1 4 ? 14.298 3.802 10.267 1.00 2.41 ? 4 GLN A OE1 1 4 UNP P05453 10 Q ATOM 46 N NE2 . GLN A 1 4 ? 14.286 5.887 11.117 1.00 2.76 ? 4 GLN A NE2 1 4 UNP P05453 10 Q ATOM 47 H H . GLN A 1 4 ? 10.511 3.824 6.308 1.00 2.16 ? 4 GLN A H 1 4 UNP P05453 10 Q ATOM 48 H HA . GLN A 1 4 ? 12.035 6.231 6.666 1.00 2.18 ? 4 GLN A HA 1 4 UNP P05453 10 Q ATOM 49 H HB2 . GLN A 1 4 ? 11.539 5.376 8.848 1.00 2.20 ? 4 GLN A HB2 1 4 UNP P05453 10 Q ATOM 50 H HB3 . GLN A 1 4 ? 12.259 4.023 8.436 1.00 2.20 ? 4 GLN A HB3 1 4 UNP P05453 10 Q ATOM 51 H HG2 . GLN A 1 4 ? 14.289 5.365 8.129 1.00 2.31 ? 4 GLN A HG2 1 4 UNP P05453 10 Q ATOM 52 H HG3 . GLN A 1 4 ? 13.509 6.526 8.866 1.00 2.32 ? 4 GLN A HG3 1 4 UNP P05453 10 Q ATOM 53 H HE21 . GLN A 1 4 ? 14.182 5.638 11.934 1.00 2.62 ? 4 GLN A HE21 1 4 UNP P05453 10 Q ATOM 54 H HE22 . GLN A 1 4 ? 14.514 6.699 10.941 1.00 2.62 ? 4 GLN A HE22 1 4 UNP P05453 10 Q ATOM 55 N N . GLN A 1 5 ? 13.784 5.273 5.157 1.00 2.43 ? 5 GLN A N 1 5 UNP P05453 11 Q ATOM 56 C CA . GLN A 1 5 ? 14.804 4.682 4.267 1.00 2.65 ? 5 GLN A CA 1 5 UNP P05453 11 Q ATOM 57 C C . GLN A 1 5 ? 16.159 5.290 4.708 1.00 2.76 ? 5 GLN A C 1 5 UNP P05453 11 Q ATOM 58 O O . GLN A 1 5 ? 16.246 6.506 4.856 1.00 2.71 ? 5 GLN A O 1 5 UNP P05453 11 Q ATOM 59 C CB . GLN A 1 5 ? 14.458 4.913 2.787 1.00 3.33 ? 5 GLN A CB 1 5 UNP P05453 11 Q ATOM 60 C CG . GLN A 1 5 ? 13.256 4.120 2.296 1.00 3.99 ? 5 GLN A CG 1 5 UNP P05453 11 Q ATOM 61 C CD . GLN A 1 5 ? 12.754 4.568 0.946 1.00 3.97 ? 5 GLN A CD 1 5 UNP P05453 11 Q ATOM 62 O OE1 . GLN A 1 5 ? 12.554 5.771 0.727 1.00 6.00 ? 5 GLN A OE1 1 5 UNP P05453 11 Q ATOM 63 N NE2 . GLN A 1 5 ? 12.559 3.634 0.008 1.00 3.69 ? 5 GLN A NE2 1 5 UNP P05453 11 Q ATOM 64 H H . GLN A 1 5 ? 13.774 6.281 5.131 1.00 2.43 ? 5 GLN A H 1 5 UNP P05453 11 Q ATOM 65 H HA . GLN A 1 5 ? 14.846 3.713 4.400 1.00 2.74 ? 5 GLN A HA 1 5 UNP P05453 11 Q ATOM 66 H HB2 . GLN A 1 5 ? 14.268 5.857 2.669 1.00 3.31 ? 5 GLN A HB2 1 5 UNP P05453 11 Q ATOM 67 H HB3 . GLN A 1 5 ? 15.221 4.663 2.243 1.00 3.30 ? 5 GLN A HB3 1 5 UNP P05453 11 Q ATOM 68 H HG2 . GLN A 1 5 ? 13.505 3.184 2.230 1.00 3.82 ? 5 GLN A HG2 1 5 UNP P05453 11 Q ATOM 69 H HG3 . GLN A 1 5 ? 12.533 4.223 2.934 1.00 3.81 ? 5 GLN A HG3 1 5 UNP P05453 11 Q ATOM 70 H HE21 . GLN A 1 5 ? 11.804 3.585 -0.401 1.00 3.78 ? 5 GLN A HE21 1 5 UNP P05453 11 Q ATOM 71 H HE22 . GLN A 1 5 ? 13.189 3.079 -0.183 1.00 3.78 ? 5 GLN A HE22 1 5 UNP P05453 11 Q ATOM 72 N N . ASN A 1 6 ? 17.142 4.421 4.960 1.00 2.87 ? 6 ASN A N 1 6 UNP P05453 12 N ATOM 73 C CA . ASN A 1 6 ? 18.453 4.763 5.528 1.00 3.08 ? 6 ASN A CA 1 6 UNP P05453 12 N ATOM 74 C C . ASN A 1 6 ? 19.571 4.290 4.542 1.00 3.34 ? 6 ASN A C 1 6 UNP P05453 12 N ATOM 75 O O . ASN A 1 6 ? 19.787 3.067 4.399 1.00 4.18 ? 6 ASN A O 1 6 UNP P05453 12 N ATOM 76 C CB . ASN A 1 6 ? 18.637 4.098 6.888 1.00 2.95 ? 6 ASN A CB 1 6 UNP P05453 12 N ATOM 77 C CG . ASN A 1 6 ? 17.517 4.409 7.853 1.00 2.82 ? 6 ASN A CG 1 6 UNP P05453 12 N ATOM 78 O OD1 . ASN A 1 6 ? 17.413 5.537 8.352 1.00 3.13 ? 6 ASN A OD1 1 6 UNP P05453 12 N ATOM 79 N ND2 . ASN A 1 6 ? 16.622 3.436 8.094 1.00 3.05 ? 6 ASN A ND2 1 6 UNP P05453 12 N ATOM 80 H H . ASN A 1 6 ? 17.064 3.432 4.772 1.00 2.89 ? 6 ASN A H 1 6 UNP P05453 12 N ATOM 81 H HA . ASN A 1 6 ? 18.536 5.731 5.651 1.00 3.06 ? 6 ASN A HA 1 6 UNP P05453 12 N ATOM 82 H HB2 . ASN A 1 6 ? 18.681 3.136 6.773 1.00 2.96 ? 6 ASN A HB2 1 6 UNP P05453 12 N ATOM 83 H HB3 . ASN A 1 6 ? 19.463 4.418 7.282 1.00 2.95 ? 6 ASN A HB3 1 6 UNP P05453 12 N ATOM 84 H HD21 . ASN A 1 6 ? 16.065 3.471 8.897 1.00 2.98 ? 6 ASN A HD21 1 6 UNP P05453 12 N ATOM 85 H HD22 . ASN A 1 6 ? 16.527 2.684 7.469 1.00 2.98 ? 6 ASN A HD22 1 6 UNP P05453 12 N ATOM 86 N N . TYR A 1 7 ? 20.271 5.222 3.889 1.00 4.39 ? 7 TYR A N 1 7 UNP P05453 13 Y ATOM 87 C CA . TYR A 1 7 ? 21.315 4.909 2.878 1.00 4.96 ? 7 TYR A CA 1 7 UNP P05453 13 Y ATOM 88 C C . TYR A 1 7 ? 22.732 4.955 3.453 1.00 7.00 ? 7 TYR A C 1 7 UNP P05453 13 Y ATOM 89 O O . TYR A 1 7 ? 23.006 5.601 4.469 1.00 7.88 ? 7 TYR A O 1 7 UNP P05453 13 Y ATOM 90 C CB . TYR A 1 7 ? 21.160 5.835 1.664 1.00 5.64 ? 7 TYR A CB 1 7 UNP P05453 13 Y ATOM 91 C CG . TYR A 1 7 ? 19.870 5.616 0.957 1.00 6.36 ? 7 TYR A CG 1 7 UNP P05453 13 Y ATOM 92 C CD1 . TYR A 1 7 ? 18.682 6.307 1.345 1.00 6.73 ? 7 TYR A CD1 1 7 UNP P05453 13 Y ATOM 93 C CD2 . TYR A 1 7 ? 19.741 4.628 -0.015 1.00 7.73 ? 7 TYR A CD2 1 7 UNP P05453 13 Y ATOM 94 C CE1 . TYR A 1 7 ? 17.452 6.035 0.746 1.00 8.58 ? 7 TYR A CE1 1 7 UNP P05453 13 Y ATOM 95 C CE2 . TYR A 1 7 ? 18.507 4.358 -0.617 1.00 9.45 ? 7 TYR A CE2 1 7 UNP P05453 13 Y ATOM 96 C CZ . TYR A 1 7 ? 17.360 5.038 -0.245 1.00 9.25 ? 7 TYR A CZ 1 7 UNP P05453 13 Y ATOM 97 O OH . TYR A 1 7 ? 16.130 4.790 -0.851 1.00 14.20 ? 7 TYR A OH 1 7 UNP P05453 13 Y ATOM 98 O OXT . TYR A 1 7 ? 23.631 4.336 2.877 1.00 8.71 ? 7 TYR A OXT 1 7 UNP P05453 13 Y ATOM 99 H H . TYR A 1 7 ? 20.145 6.215 4.029 1.00 4.23 ? 7 TYR A H 1 7 UNP P05453 13 Y ATOM 100 H HA . TYR A 1 7 ? 21.179 4.000 2.543 1.00 5.29 ? 7 TYR A HA 1 7 UNP P05453 13 Y ATOM 101 H HB2 . TYR A 1 7 ? 21.192 6.757 1.959 1.00 5.62 ? 7 TYR A HB2 1 7 UNP P05453 13 Y ATOM 102 H HB3 . TYR A 1 7 ? 21.880 5.661 1.038 1.00 5.64 ? 7 TYR A HB3 1 7 UNP P05453 13 Y ATOM 103 H HD1 . TYR A 1 7 ? 18.728 6.951 2.014 1.00 7.05 ? 7 TYR A HD1 1 7 UNP P05453 13 Y ATOM 104 H HD2 . TYR A 1 7 ? 20.489 4.138 -0.269 1.00 7.74 ? 7 TYR A HD2 1 7 UNP P05453 13 Y ATOM 105 H HE1 . TYR A 1 7 ? 16.695 6.511 1.001 1.00 8.26 ? 7 TYR A HE1 1 7 UNP P05453 13 Y ATOM 106 H HE2 . TYR A 1 7 ? 18.455 3.704 -1.277 1.00 8.97 ? 7 TYR A HE2 1 7 UNP P05453 13 Y ATOM 107 H HH . TYR A 1 7 ? 15.582 4.558 -0.287 1.00 12.41 ? 7 TYR A HH 1 7 UNP P05453 13 Y HETATM 108 O O . HOH B 2 . ? 25.486 6.155 1.883 1.00 18.76 ? 101 HOH A O 1 101 ? ? ? ? HETATM 109 O O . HOH B 2 . ? 0.818 7.526 9.986 1.00 17.71 ? 102 HOH A O 1 102 ? ? ? ? HETATM 110 O O . HOH B 2 . ? 21.609 6.103 6.876 1.00 11.15 ? 103 HOH A O 1 103 ? ? ? ? HETATM 111 O O . HOH B 2 . ? 4.682 4.837 2.701 1.00 14.56 ? 104 HOH A O 1 104 ? ? ? ? HETATM 112 O O . HOH B 2 . ? 4.748 2.319 3.972 1.00 12.75 ? 105 HOH A O 1 105 ? ? ? ? HETATM 113 O O . HOH B 2 . ? 1.108 5.904 12.157 1.00 11.90 ? 106 HOH A O 1 106 ? ? ? ? # _pdbx_sifts_unp_segments.entity_id 1 _pdbx_sifts_unp_segments.asym_id A _pdbx_sifts_unp_segments.unp_acc P05453 _pdbx_sifts_unp_segments.segment_id 1 _pdbx_sifts_unp_segments.instance_id 1 _pdbx_sifts_unp_segments.unp_start 7 _pdbx_sifts_unp_segments.unp_end 13 _pdbx_sifts_unp_segments.seq_id_start 1 _pdbx_sifts_unp_segments.seq_id_end 7 _pdbx_sifts_unp_segments.best_mapping y _pdbx_sifts_unp_segments.identity 1.0 # loop_ _pdbx_sifts_xref_db.entity_id _pdbx_sifts_xref_db.asym_id _pdbx_sifts_xref_db.seq_id_ordinal _pdbx_sifts_xref_db.seq_id _pdbx_sifts_xref_db.mon_id _pdbx_sifts_xref_db.mon_id_one_letter_code _pdbx_sifts_xref_db.unp_res _pdbx_sifts_xref_db.unp_num _pdbx_sifts_xref_db.unp_acc _pdbx_sifts_xref_db.unp_segment_id _pdbx_sifts_xref_db.unp_instance_id _pdbx_sifts_xref_db.res_type _pdbx_sifts_xref_db.observed _pdbx_sifts_xref_db.mh_id _pdbx_sifts_xref_db.xref_db_name _pdbx_sifts_xref_db.xref_db_acc _pdbx_sifts_xref_db.xref_domain_name _pdbx_sifts_xref_db.xref_db_segment_id _pdbx_sifts_xref_db.xref_db_instance_id 1 A 1 1 GLY G G 7 P05453 1 1 ? y 1 ? ? ? ? ? 1 A 1 2 ASN N N 8 P05453 1 1 ? y 1 ? ? ? ? ? 1 A 1 3 ASN N N 9 P05453 1 1 ? y 1 ? ? ? ? ? 1 A 1 4 GLN Q Q 10 P05453 1 1 ? y 1 ? ? ? ? ? 1 A 1 5 GLN Q Q 11 P05453 1 1 ? y 1 ? ? ? ? ? 1 A 1 6 ASN N N 12 P05453 1 1 ? y 1 ? ? ? ? ? 1 A 1 7 TYR Y Y 13 P05453 1 1 ? y 1 ? ? ? ? ? #