› 1arp

X-ray diffraction
1.9Å resolution

Crystal structure of the fungal peroxidase from Arthromyces ramosus at 1.9 angstroms resolution: structural comparisons with the lignin and cytochrome C peroxidases

Released:
DOI: 10.2210/pdb1arp/pdb
PDB entry 1arp coloured by chain, front view.
PDB entry 1arp coloured by chain, side view.
PDB entry 1arp coloured by chain, top view.
Source organism: Penicillium janthinellum
Primary publication:
Crystal structure of the fungal peroxidase from Arthromyces ramosus at 1.9 A resolution. Structural comparisons with the lignin and cytochrome c peroxidases.
Kunishima N, Fukuyama K, Matsubara H, Hatanaka H, Shibano Y, Amachi T
J Mol Biol 235 331-44 (1994)
PMID: 8289254

Function and Biology Details

Reaction catalysed: 
2 phenolic donor + H(2)O(2) = 2 phenoxyl radical of the donor + 2 H(2)O
Biochemical function:
Biological process:
Cellular component:
Sequence domains:
Structure domain:

Structure analysis Details

Assembly composition:
monomeric (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-151200 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecules (2 distinct):
Peroxidase Chain: A
Molecule details ›
Chain: A
Length: 344 amino acids
Theoretical weight: 35.72 KDa
Source organism: Penicillium janthinellum
Expression system: Not provided
UniProt:
  • Canonical: P28313 (Residues: 21-364; Coverage: 100%)
Sequence domains:
Structure domains:

Ligands and Environments


Cofactor: Ligand HEM 1 x HEM
Carbohydrate polymer : NEW Components: NAG
Carbohydrate polymer
1 bound ligand:
Ligand CA 2 x CA
No modified residues

Experiments and Validation Details

Entry percentile scores
Spacegroup: P42212
Unit cell:
a: 74.57Å b: 74.57Å c: 117.47Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.174 0.174 not available
Expression system: Not provided

Quick links

Citations

11 review citations

New and classic families of secreted fungal heme peroxidases.
Hofrichter et al. (2010)
10 more

8 mentions without citation

Crystal structure of an oxygen-binding heme domain related to soluble guanylate cyclases.
Pellicena et al. (2004)
7 more