› 1pw5

X-ray diffraction
2.8Å resolution

putative nagD protein

Released:
DOI: 10.2210/pdb1pw5/pdb
PDB entry 1pw5 coloured by chain, front view.
PDB entry 1pw5 coloured by chain, side view.
PDB entry 1pw5 coloured by chain, top view.
Source organism: Thermotoga maritima
Entry authors: Cuff ME, Skarina T, Savchenko A, Edwards A, Joachimiak A, Midwest Center for Structural Genomics (MCSG)

Function and Biology Details

Biochemical function:
Biological process:
  • not assigned
Cellular component:
Sequence domains:
Structure domain:

Structure analysis Details

Assembly composition:
monomeric (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-578490 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
NagD protein, putative Chain: A
Molecule details ›
Chain: A
Length: 253 amino acids
Theoretical weight: 28.56 KDa
Source organism: Thermotoga maritima
Expression system: Escherichia coli
UniProt:
  • Canonical: Q9X264 (Residues: 1-253; Coverage: 98%)
Gene name: TM_1742
Sequence domains:
Structure domains: HAD superfamily/HAD-like

Ligands and Environments

2 bound ligands:
Ligand NDG 1 x NDG
Ligand SO4 2 x SO4
1 modified residue:
Ligand MSE 7 x MSE

Experiments and Validation Details

Entry percentile scores
X-ray source: APS BEAMLINE 19-ID
Spacegroup: P41212
Unit cell:
a: 97.788Å b: 97.788Å c: 159.27Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.244 0.244 0.279
Expression system: Escherichia coli

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