1q0w

Solution NMR

Solution structure of Vps27 amino-terminal UIM-ubiquitin complex

Released:

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned

Structure analysis Details

Assembly composition:
hetero dimer (preferred)
PDBe Complex ID:
PDB-CPX-533960 (preferred)
Entry contents:
2 distinct polypeptide molecules
Macromolecules (2 distinct):
Vacuolar protein sorting-associated protein 27 Chain: A
Molecule details ›
Chain: A
Length: 24 amino acids
Theoretical weight: 2.82 KDa
Source organism: Saccharomyces cerevisiae S288C
Expression system: Not provided
UniProt:
  • Canonical: P40343 (Residues: 255-278; Coverage: 4%)
Gene names: DID7, GRD11, N2038, SSV17, VPL23, VPS27, VPT27, YNR006W
Sequence domains: Ubiquitin interaction motif
Ubiquitin Chain: B
Molecule details ›
Chain: B
Length: 76 amino acids
Theoretical weight: 8.57 KDa
Source organism: Saccharomyces cerevisiae
Expression system: Escherichia coli BL21(DE3)
UniProt:
  • Canonical: P0CG63 (Residues: 305-380; Coverage: 20%)
Gene names: SCD2, UBI4, YLL039C
Sequence domains: Ubiquitin family
Structure domains: Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1

Ligands and Environments

No bound ligands
No modified residues

Experiments and Validation Details

Entry percentile scores
Refinement method: TORSION ANGLE DYNAMICS AND SIMULATED ANNEALING
Expression systems:
  • Not provided
  • Escherichia coli BL21(DE3)