› 1tdo

X-ray diffraction
3Å resolution

L-amino acid oxidae from Agkistrodon halys in complex with L-phenylalanine

Released:
DOI: 10.2210/pdb1tdo/pdb
PDB entry 1tdo coloured by chain, front view.
PDB entry 1tdo coloured by chain, side view.
PDB entry 1tdo coloured by chain, top view.
Source organism: Gloydius halys
Entry authors: Zhang H, Teng M, Niu L

Function and Biology Details

Reaction catalysed: 
An L-amino acid + H(2)O + O(2) = a 2-oxo carboxylate + NH(3) + H(2)O(2)
Biochemical function:
Biological process:
Cellular component:
Sequence domains:
Structure domains:

Structure analysis Details

Assembly composition:
monomeric (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-180337 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
L-amino-acid oxidase Chain: A
Molecule details ›
Chain: A
Length: 486 amino acids
Theoretical weight: 55.21 KDa
Source organism: Gloydius halys
UniProt:
  • Canonical: Q6STF1 (Residues: 19-504; Coverage: 100%)
Sequence domains: Flavin containing amine oxidoreductase
Structure domains:

Ligands and Environments


Cofactor: Ligand FAD 1 x FAD
2 bound ligands:
Ligand NAG 2 x NAG
Ligand PHE 1 x PHE
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: BSRF BEAMLINE 3W1A
Spacegroup: I213
Unit cell:
a: 169.41Å b: 169.41Å c: 169.41Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.179 0.179 0.235

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