Articles - 1b7b mentioned but not cited (4)
- A comprehensive update of the sequence and structure classification of kinases. Cheek S, Ginalski K, Zhang H, Grishin NV. BMC Struct Biol 5 6 (2005)
- Protein binding hot spots and the residue-residue pairing preference: a water exclusion perspective. Liu Q, Li J. BMC Bioinformatics 11 244 (2010)
- Structural insight into amino group-carrier protein-mediated lysine biosynthesis: crystal structure of the LysZ·LysW complex from Thermus thermophilus. Yoshida A, Tomita T, Fujimura T, Nishiyama C, Kuzuyama T, Nishiyama M. J Biol Chem 290 435-447 (2015)
- X-ray structure and characterization of carbamate kinase from the human parasite Giardia lamblia. Galkin A, Kulakova L, Wu R, Nash TE, Dunaway-Mariano D, Herzberg O. Acta Crystallogr Sect F Struct Biol Cryst Commun 66 386-390 (2010)
Reviews citing this publication (3)
- An ecological and evolutionary context for integrated nitrogen metabolism and related signaling pathways in marine diatoms. Allen AE, Vardi A, Bowler C. Curr Opin Plant Biol 9 264-273 (2006)
- Regulation of carbamoylphosphate synthesis in Escherichia coli: an amazing metabolite at the crossroad of arginine and pyrimidine biosynthesis. Charlier D, Nguyen Le Minh P, Roovers M. Amino Acids 50 1647-1661 (2018)
- Sources and Fates of Carbamyl Phosphate: A Labile Energy-Rich Molecule with Multiple Facets. Shi D, Caldovic L, Tuchman M. Biology (Basel) 7 E34 (2018)
Articles citing this publication (30)
- Sequence and structure classification of kinases. Cheek S, Zhang H, Grishin NV. J Mol Biol 320 855-881 (2002)
- Structure of acetylglutamate kinase, a key enzyme for arginine biosynthesis and a prototype for the amino acid kinase enzyme family, during catalysis. Ramón-Maiques S, Marina A, Gil-Ortiz F, Fita I, Rubio V. Structure 10 329-342 (2002)
- Gene structure, organization, expression, and potential regulatory mechanisms of arginine catabolism in Enterococcus faecalis. Barcelona-Andrés B, Marina A, Rubio V. J Bacteriol 184 6289-6300 (2002)
- Structural bases of feed-back control of arginine biosynthesis, revealed by the structures of two hexameric N-acetylglutamate kinases, from Thermotoga maritima and Pseudomonas aeruginosa. Ramón-Maiques S, Fernández-Murga ML, Gil-Ortiz F, Vagin A, Fita I, Rubio V. J Mol Biol 356 695-713 (2006)
- The gene cluster for agmatine catabolism of Enterococcus faecalis: study of recombinant putrescine transcarbamylase and agmatine deiminase and a snapshot of agmatine deiminase catalyzing its reaction. Llácer JL, Polo LM, Tavárez S, Alarcón B, Hilario R, Rubio V. J Bacteriol 189 1254-1265 (2007)
- Characterization of thermophilic archaeal isopentenyl phosphate kinases. Chen M, Poulter CD. Biochemistry 49 207-217 (2010)
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- The 1.5 A resolution crystal structure of the carbamate kinase-like carbamoyl phosphate synthetase from the hyperthermophilic Archaeon pyrococcus furiosus, bound to ADP, confirms that this thermostable enzyme is a carbamate kinase, and provides insight into substrate binding and stability in carbamate kinases. Ramón-Maiques S, Marina A, Uriarte M, Fita I, Rubio V. J Mol Biol 299 463-476 (2000)
- Site-directed mutagenesis of Escherichia coli acetylglutamate kinase and aspartokinase III probes the catalytic and substrate-binding mechanisms of these amino acid kinase family enzymes and allows three-dimensional modelling of aspartokinase. Marco-Marín C, Ramón-Maiques S, Tavárez S, Rubio V. J Mol Biol 334 459-476 (2003)
- The course of phosphorus in the reaction of N-acetyl-L-glutamate kinase, determined from the structures of crystalline complexes, including a complex with an AlF(4)(-) transition state mimic. Gil-Ortiz F, Ramón-Maiques S, Fita I, Rubio V. J Mol Biol 331 231-244 (2003)
- Changes in dynamics upon oligomerization regulate substrate binding and allostery in amino acid kinase family members. Marcos E, Crehuet R, Bahar I. PLoS Comput Biol 7 e1002201 (2011)
- The crystal structure of N-acetyl-L-glutamate synthase from Neisseria gonorrhoeae provides insights into mechanisms of catalysis and regulation. Shi D, Sagar V, Jin Z, Yu X, Caldovic L, Morizono H, Allewell NM, Tuchman M. J Biol Chem 283 7176-7184 (2008)
- Mutation of archaeal isopentenyl phosphate kinase highlights mechanism and guides phosphorylation of additional isoprenoid monophosphates. Dellas N, Noel JP. ACS Chem Biol 5 589-601 (2010)
- Letter Studies on cyanobacterial protein PipY shed light on structure, potential functions, and vitamin B6 -dependent epilepsy. Tremiño L, Forcada-Nadal A, Contreras A, Rubio V. FEBS Lett 591 3431-3442 (2017)
- The carbamoyl-phosphate synthetase of Pyrococcus furiosus is enzymologically and structurally a carbamate kinase. Uriarte M, Marina A, Ramón-Maiques S, Fita I, Rubio V. J Biol Chem 274 16295-16303 (1999)
- X-ray structures of isopentenyl phosphate kinase. Mabanglo MF, Schubert HL, Chen M, Hill CP, Poulter CD. ACS Chem Biol 5 517-527 (2010)
- Identification of regions of the tomato gamma-glutamyl kinase that are involved in allosteric regulation by proline. Fujita T, Maggio A, Garcia-Rios M, Stauffacher C, Bressan RA, Csonka LN. J Biol Chem 278 14203-14210 (2003)
- High-throughput fitness screening and transcriptomics identify a role for a type IV secretion system in the pathogenesis of Crohn's disease-associated Escherichia coli. Elhenawy W, Hordienko S, Gould S, Oberc AM, Tsai CN, Hubbard TP, Waldor MK, Coombes BK. Nat Commun 12 2032 (2021)
- Crystal structure of fosfomycin resistance kinase FomA from Streptomyces wedmorensis. Pakhomova S, Bartlett SG, Augustus A, Kuzuyama T, Newcomer ME. J Biol Chem 283 28518-28526 (2008)
- Substrate binding and catalysis in carbamate kinase ascertained by crystallographic and site-directed mutagenesis studies: movements and significance of a unique globular subdomain of this key enzyme for fermentative ATP production in bacteria. Ramón-Maiques S, Marina A, Guinot A, Gil-Ortiz F, Uriarte M, Fita I, Rubio V. J Mol Biol 397 1261-1275 (2010)
- UMP kinase from Streptococcus pneumoniae: evidence for co-operative ATP binding and allosteric regulation. Fassy F, Krebs O, Lowinski M, Ferrari P, Winter J, Collard-Dutilleul V, Salahbey Hocini K. Biochem J 384 619-627 (2004)
- UMP kinase from the Gram-positive bacterium Bacillus subtilis is strongly dependent on GTP for optimal activity. Gagyi C, Bucurenci N, Sîrbu O, Labesse G, Ionescu M, Ofiteru A, Assairi L, Landais S, Danchin A, Bârzu O, Gilles AM. Eur J Biochem 270 3196-3204 (2003)
- Comparative modelling and immunochemical reactivity of Escherichia coli UMP kinase. Labesse G, Bucurenci N, Douguet D, Sakamoto H, Landais S, Gagyi C, Gilles AM, Bârzu O. Biochem Biophys Res Commun 294 173-179 (2002)
- Unique GTP-binding pocket and allostery of uridylate kinase from a gram-negative phytopathogenic bacterium. Tu JL, Chin KH, Wang AH, Chou SH. J Mol Biol 385 1113-1126 (2009)
- Carbamate kinase can replace in vivo carbamoyl phosphate synthetase. Implications for the evolution of carbamoyl phosphate biosynthesis. Alcántara C, Cervera J, Rubio V. FEBS Lett 484 261-264 (2000)
- Structural and biochemical insights into the mechanism of fosfomycin phosphorylation by fosfomycin resistance kinase FomA. Pakhomova S, Bartlett SG, Doerner PA, Newcomer ME. Biochemistry 50 6909-6919 (2011)
- Enhanced production of L-arginine by improving carbamoyl phosphate supply in metabolically engineered Corynebacterium crenatum. Wang Q, Jiang A, Tang J, Gao H, Zhang X, Yang T, Xu Z, Xu M, Rao Z. Appl Microbiol Biotechnol 105 3265-3276 (2021)
- On defining the dynamics of hydrophobic patches on protein surfaces. Lijnzaad P, Feenstra KA, Heringa J, Holstege FC. Proteins 72 105-114 (2008)
- Water-mediated network in the resistance mechanism of fosfomycin. McClory J, Lin JT, Timson DJ, Zhang J, Huang M. Phys Chem Chem Phys 20 21660-21667 (2018)
- Molecular Basis for the Substrate Promiscuity of Isopentenyl Phosphate Kinase from Candidatus methanomethylophilus alvus. Johnson BP, Kumar V, Scull EM, Thomas LM, Bourne CR, Singh S. ACS Chem Biol 17 85-102 (2022)