1bxi › Citations

Crystal Structure of the E.Coli Colicin E9 DNase Domain With its Cognate Immunity Protein Im9

Kuhlmann UC
Thesis (1998)
Cited: 27 times

Reviews - 1bxi mentioned but not cited (2)

  1. Colicin biology. Cascales E, Buchanan SK, Duché D, Kleanthous C, Lloubès R, Postle K, Riley M, Slatin S, Cavard D. Microbiol Mol Biol Rev 71 158-229 (2007)
  2. Teneurin Structures Are Composed of Ancient Bacterial Protein Domains. Jackson VA, Busby JN, Janssen BJC, Lott JS, Seiradake E. Front Neurosci 13 183 (2019)

Articles - 1bxi mentioned but not cited (25)

  1. Structural classification of zinc fingers: survey and summary. Krishna SS, Majumdar I, Grishin NV. Nucleic Acids Res 31 532-550 (2003)
  2. Conservation and relative importance of residues across protein-protein interfaces. Guharoy M, Chakrabarti P. Proc Natl Acad Sci U S A 102 15447-15452 (2005)
  3. Achieving reliability and high accuracy in automated protein docking: ClusPro, PIPER, SDU, and stability analysis in CAPRI rounds 13-19. Kozakov D, Hall DR, Beglov D, Brenke R, Comeau SR, Shen Y, Li K, Zheng J, Vakili P, Paschalidis ICh, Vajda S. Proteins 78 3124-3130 (2010)
  4. Insufficiently dehydrated hydrogen bonds as determinants of protein interactions. Fernández A, Scheraga HA. Proc Natl Acad Sci U S A 100 113-118 (2003)
  5. A feature-based approach to modeling protein-protein interaction hot spots. Cho KI, Kim D, Lee D. Nucleic Acids Res 37 2672-2687 (2009)
  6. Treble clef finger--a functionally diverse zinc-binding structural motif. Grishin NV. Nucleic Acids Res 29 1703-1714 (2001)
  7. APIS: accurate prediction of hot spots in protein interfaces by combining protrusion index with solvent accessibility. Xia JF, Zhao XM, Song J, Huang DS. BMC Bioinformatics 11 174 (2010)
  8. SwarmDock and the use of normal modes in protein-protein docking. Moal IH, Bates PA. Int J Mol Sci 11 3623-3648 (2010)
  9. Type II restriction endonuclease R.KpnI is a member of the HNH nuclease superfamily. Saravanan M, Bujnicki JM, Cymerman IA, Rao DN, Nagaraja V. Nucleic Acids Res 32 6129-6135 (2004)
  10. DrugScorePPI webserver: fast and accurate in silico alanine scanning for scoring protein-protein interactions. Krüger DM, Gohlke H. Nucleic Acids Res 38 W480-6 (2010)
  11. Prediction of hot spot residues at protein-protein interfaces by combining machine learning and energy-based methods. Lise S, Archambeau C, Pontil M, Jones DT. BMC Bioinformatics 10 365 (2009)
  12. Applying physics-based scoring to calculate free energies of binding for single amino acid mutations in protein-protein complexes. Beard H, Cholleti A, Pearlman D, Sherman W, Loving KA. PLoS One 8 e82849 (2013)
  13. Identification of hot-spot residues in protein-protein interactions by computational docking. Grosdidier S, Fernández-Recio J. BMC Bioinformatics 9 447 (2008)
  14. Dehydron: a structurally encoded signal for protein interaction. Fernández A, Scott R. Biophys J 85 1914-1928 (2003)
  15. An integrated suite of fast docking algorithms. Mashiach E, Schneidman-Duhovny D, Peri A, Shavit Y, Nussinov R, Wolfson HJ. Proteins 78 3197-3204 (2010)
  16. Crystal structure of the response regulator 02 receiver domain, the essential YycF two-component system of Streptococcus pneumoniae in both complexed and native states. Bent CJ, Isaacs NW, Mitchell TJ, Riboldi-Tunnicliffe A. J Bacteriol 186 2872-2879 (2004)
  17. 'Double water exclusion': a hypothesis refining the O-ring theory for the hot spots at protein interfaces. Li J, Liu Q. Bioinformatics 25 743-750 (2009)
  18. MDockPP: A hierarchical approach for protein-protein docking and its application to CAPRI rounds 15-19. Huang SY, Zou X. Proteins 78 3096-3103 (2010)
  19. Protein-protein interface hot spots prediction based on a hybrid feature selection strategy. Qiao Y, Xiong Y, Gao H, Zhu X, Chen P. BMC Bioinformatics 19 14 (2018)
  20. Structures of Teneurin adhesion receptors reveal an ancient fold for cell-cell interaction. Jackson VA, Meijer DH, Carrasquero M, van Bezouwen LS, Lowe ED, Kleanthous C, Janssen BJC, Seiradake E. Nat Commun 9 1079 (2018)
  21. Identification of hot spot residues at protein-protein interface. Li L, Zhao B, Cui Z, Gan J, Sakharkar MK, Kangueane P. Bioinformation 1 121-126 (2006)
  22. Cell-free production of Gaussia princeps luciferase--antibody fragment bioconjugates for ex vivo detection of tumor cells. Patel KG, Ng PP, Kuo CC, Levy S, Levy R, Swartz JR. Biochem Biophys Res Commun 390 971-976 (2009)
  23. E9-Im9 colicin DNase-immunity protein biomolecular association in water: a multiple-copy and accelerated molecular dynamics simulation study. Baron R, Wong SE, de Oliveira CA, McCammon JA. J Phys Chem B 112 16802-16814 (2008)
  24. Co-Occurring Atomic Contacts for the Characterization of Protein Binding Hot Spots. Liu Q, Ren J, Song J, Li J. PLoS One 10 e0144486 (2015)
  25. Hot-spot residues at the E9/Im9 interface help binding via different mechanisms. Wong SE, Baron R, McCammon JA. Biopolymers 89 916-920 (2008)




Related citations provided by authors (1)

  1. Structural and Mechanistic Basis of Immunity Toward Endonuclease Colicins. Kleanthous C, Kuhlmann UC, Pommer AJ, Radford NFerguson SE, Moore GR, James R, Hemmings AM Nat. Struct. Biol. 6 243- (1999)

Quick links