› 1e3i

X-ray diffraction
2.08Å resolution

Mouse class II alcohol dehydrogenase complex with NADH and inhibitor

Released:
DOI: 10.2210/pdb1e3i/pdb
PDB entry 1e3i coloured by chain, front view.
PDB entry 1e3i coloured by chain, side view.
PDB entry 1e3i coloured by chain, top view.
Source organism: Mus musculus
Primary publication:
Crystal structures of mouse class II alcohol dehydrogenase reveal determinants of substrate specificity and catalytic efficiency.
Svensson S, Höög JO, Schneider G, Sandalova T
J Mol Biol 302 441-53 (2000)
PMID: 10970744

Function and Biology Details

Reaction catalysed: 
All-trans-retinol-[cellular-retinol-binding-protein] + NAD(+) = all-trans-retinal-[cellular-retinol-binding-protein] + NADH
Biochemical function:
Biological process:
Cellular component:
Sequence domains:
Structure domains:

Structure analysis Details

Assembly composition:
homo dimer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-576757 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
All-trans-retinol dehydrogenase [NAD(+)] ADH4 Chains: A, B
Molecule details ›
Chains: A, B
Length: 376 amino acids
Theoretical weight: 40.09 KDa
Source organism: Mus musculus
Expression system: Escherichia coli BL21(DE3)
UniProt:
  • Canonical: Q9QYY9 (Residues: 2-377; Coverage: 100%)
Gene names: Adh2, Adh4
Sequence domains:
Structure domains:

Ligands and Environments


Cofactor: Ligand NAI 2 x NAI
2 bound ligands:
Ligand CXF 2 x CXF
Ligand ZN 4 x ZN
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: MAX II BEAMLINE I711
Spacegroup: P212121
Unit cell:
a: 79.253Å b: 81.07Å c: 102.187Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.198 0.198 0.228
Expression system: Escherichia coli BL21(DE3)

Quick links

Citations

2 review citations

Ethanol's molecular targets.
Harris et al. (2008)
1 more

4 mentions without citation

Modeling of molecular interaction between apoptin, BCR-Abl and CrkL--an alternative approach to conventional rational drug design.
Panigrahi et al. (2012)
3 more