1f5p Citations

Crystalline ligand transitions in lamprey hemoglobin. Structural evidence for the regulation of oxygen affinity.

J Biol Chem 276 26230-6 (2001)
Cited: 5 times
EuropePMC logo PMID: 11340069

Abstract

The hemoglobins of the Sea Lamprey (Petromyzon marinus) exist in an equilibrium between low affinity oligomers, stabilized by proton binding, and higher affinity monomers, stabilized by oxygen binding. Recent crystallographic analysis revealed that dimerization is coupled with key changes at the ligand binding site with the distal histidine sterically restricting ligand binding in the deoxy dimer but with no significant structural rearrangements on the proximal side. These structural insights led to the hypothesis that oxygen affinity of lamprey hemoglobin is distally regulated. Here we present the 2.9-A crystal structure of deoxygenated lamprey hemoglobin in an orthorhombic crystal form along with the structure of these crystals exposed to carbon monoxide. The hexameric assemblage in this crystal form is very similar to those observed in the previous deoxy structure. Whereas the hydrogen bonding network and packing contacts formed in the dimeric interface of lamprey hemoglobin are largely unaffected by ligand binding, the binding of carbon monoxide induces the distal histidine to swing to positions that would preclude the formation of a stabilizing hydrogen bond with the bound ligand. These results suggest a dual role for the distal histidine and strongly support the hypothesis that ligand affinity in lamprey hemoglobin is distally regulated.

Reviews citing this publication (1)

  1. Tertiary and quaternary effects in the allosteric regulation of animal hemoglobins. Ronda L, Bruno S, Bettati S. Biochim Biophys Acta 1834 1860-1872 (2013)

Articles citing this publication (4)

  1. Crystal structure of cytoglobin: the fourth globin type discovered in man displays heme hexa-coordination. de Sanctis D, Dewilde S, Pesce A, Moens L, Ascenzi P, Hankeln T, Burmester T, Bolognesi M. J Mol Biol 336 917-927 (2004)
  2. Finding biologically relevant protein domain interactions: conserved binding mode analysis. Shoemaker BA, Panchenko AR, Bryant SH. Protein Sci 15 352-361 (2006)
  3. Dimerization-based control of cooperativity. Bouhaddou M, Birtwistle MR. Mol Biosyst 10 1824-1832 (2014)
  4. Structure of the partially unliganded met state of 400 kDa hemoglobin: insights into ligand-induced structural changes of giant hemoglobins. Numoto N, Nakagawa T, Kita A, Sasayama Y, Fukumori Y, Miki K. Proteins 73 113-125 (2008)


Related citations provided by authors (1)