› 1j9i

Solution NMR

STRUCTURE OF THE DNA BINDING DOMAIN OF THE GPNU1 SUBUNIT OF LAMBDA TERMINASE

Released:
DOI: 10.2210/pdb1j9i/pdb
PDB entry 1j9i coloured by chain, ensemble of 20 models, front view.
PDB entry 1j9i coloured by chain, ensemble of 20 models, side view.
PDB entry 1j9i coloured by chain, ensemble of 20 models, top view.
Source organism: Escherichia virus Lambda
Primary publication:
Insights into specific DNA recognition during the assembly of a viral genome packaging machine.
de Beer T, Fang J, Ortega M, Yang Q, Maes L, Duffy C, Berton N, Sippy J, Overduin M, Feiss M, Catalano CE
Mol Cell 9 981-91 (2002)
PMID: 12049735

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned
Sequence domains:
Structure domain:

Structure analysis Details

Assembly composition:
homo dimer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-137218 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Terminase small subunit Chains: A, B
Molecule details ›
Chains: A, B
Length: 68 amino acids
Theoretical weight: 7.82 KDa
Source organism: Escherichia virus Lambda
Expression system: Escherichia coli
UniProt:
  • Canonical: P03707 (Residues: 1-68; Coverage: 38%)
Gene names: Nu1, lambdap01
Sequence domains: Phage DNA packaging protein Nu1
Structure domains: Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain

Ligands and Environments

No bound ligands
No modified residues

Experiments and Validation Details

Entry percentile scores
Refinement method: simulated annealing
Expression system: Escherichia coli

Quick links

Citations

12 review citations

Autoinduction and signal transduction in the regulation of staphylococcal virulence.
Novick RP. (2003)
11 more

7 mentions without citation

Viral Small Terminase: A Divergent Structural Framework for a Conserved Biological Function.
Lokareddy et al. (2022)
6 more