› 1mfj

Solution NMR

3' Stem-Loop from Human U4 SNRNA

Released:
DOI: 10.2210/pdb1mfj/pdb
PDB entry 1mfj coloured by chain, ensemble of 10 models, front view.
PDB entry 1mfj coloured by chain, ensemble of 10 models, side view.
PDB entry 1mfj coloured by chain, ensemble of 10 models, top view.
Source organism: Synthetic construct
Primary publication:
NMR structure of the 3' stem-loop from human U4 snRNA.
Comolli LR, Ulyanov NB, Soto AM, Marky LA, James TL, Gmeiner WH
Nucleic Acids Res 30 4371-9 (2002)
PMID: 12384583

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned

Structure analysis Details

Assembly composition:
monomeric (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-196117 (preferred)
Entry contents:
1 distinct RNA molecule
Macromolecule:
5'-R(*GP*AP*CP*AP*GP*UP*CP*UP*CP*UP*AP*CP*GP*GP*AP*GP*AP*CP*UP*G)-3' Chain: A
Molecule details ›
Chain: A
Length: 20 nucleotides
Theoretical weight: 6.42 KDa
Source organism: Synthetic construct
Expression system: Not provided

Ligands and Environments

No bound ligands
No modified residues

Experiments and Validation Details

Entry percentile scores
Refinement method: complete relaxation matrix; random error analysis of NOE; torsion angle dynamics; simulated annealing using Metropolis Monte Carlo; restrained minimization
Expression system: Not provided

Quick links

Citations

1 review citation

Recognition modes of RNA tetraloops and tetraloop-like motifs by RNA-binding proteins.
Thapar et al. (2014)
3 other articles

2 mentions without citation

Effect of Environmental Chemical Stress on Nuclear Noncoding RNA Involved in Epigenetic Control.
Arrigo et al. (2015)
1 more