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BOVINE PROTHROMBIN FRAGMENT 1 IN COMPLEX WITH CALCIUM AND LYSOPHOSPHOTIDYLSERINE

X-ray diffraction
2.3Å resolution
PDB entry 1nl2 coloured by chain, front view.
PDB entry 1nl2 coloured by chain, side view.
PDB entry 1nl2 coloured by chain, top view.
Source organism: Bos taurus
Assembly composition:
monomeric (preferred)
Entry contents: 1 distinct polypeptide molecule

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Assemblies

Assembly 1 (preferred)
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Assembly Name: Thrombin heavy chain
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Multimeric state: monomeric
Accessible surface area: 8893.79 Å2
Buried surface area: 2264.2 Å2
Dissociation area: 17.94 Å2
Dissociation energy (ΔGdiss): 5.34 kcal/mol
Dissociation entropy (TΔSdiss): 0.04 kcal/mol
Symmetry number: 1
PDBe Complex ID: PDB-CPX-133162

Macromolecules

Activation peptide fragment 1
Chain: A
Length: 146 amino acids
Theoretical weight: 16.86 KDa
Source organism: Bos taurus
UniProt:
  • Canonical: P00735 (Residues: 44-189; Coverage: 24%)
Gene name: F2
Pfam:
InterPro:
CATH: Plasminogen Kringle 4
SCOP:
Activation peptide fragment 1 in PDB entry 1nl2, assembly 1, front view.
Activation peptide fragment 1 in PDB entry 1nl2, assembly 1, side view.
Activation peptide fragment 1 in PDB entry 1nl2, assembly 1, top view.
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