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Very-short-patch DNA repair endonuclease bound to its reaction product site

Source organism: Escherichia coli
Biochemical function: endonuclease activity
Biological process: mismatch repair
Cellular component: not assigned

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GO terms

Biochemical function:
Biological process:
Cellular component:
  • not assigned

Sequence family

Pfam Protein family (Pfam)
PF03852
Domain description: DNA mismatch endonuclease Vsr
Occurring in:
  1. DNA mismatch endonuclease Vsr
The deposited structure of PDB entry 1odg contains 1 copy of Pfam domain PF03852 (DNA mismatch endonuclease Vsr) in DNA mismatch endonuclease Vsr. Showing 1 copy in chain A.

InterPro InterPro annotations
IPR004603
Domain description: DNA mismatch endonuclease VSR
Occurring in:
  1. DNA mismatch endonuclease Vsr
IPR011335
Domain description: Restriction endonuclease type II-like
Occurring in:
  1. DNA mismatch endonuclease Vsr

Structure domain

CATH CATH domain
3.40.960.10
Class: Alpha Beta
Architecture: 3-Layer(aba) Sandwich
Topology: Endonuclease; Chain A
Homology: VSR Endonuclease
Occurring in:
  1. DNA mismatch endonuclease Vsr
The deposited structure of PDB entry 1odg contains 1 copy of CATH domain 3.40.960.10 (Endonuclease; Chain A) in DNA mismatch endonuclease Vsr. Showing 1 copy in chain A.
SCOP SCOP annotation
53023
Class: Alpha and beta proteins (a/b)
Fold: Restriction endonuclease-like
Superfamily: Restriction endonuclease-like
Occurring in:
  1. DNA mismatch endonuclease Vsr
The deposited structure of PDB entry 1odg contains 1 copy of SCOP domain 53023 (Very short patch repair (VSR) endonuclease) in DNA mismatch endonuclease Vsr. Showing 1 copy in chain A.

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