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Structure of the complex between OspB-CT and bactericidal Fab-H6831

Source organisms:
Biochemical function: not assigned
Biological process: not assigned
Cellular component: cell outer membrane

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GO terms

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:

Sequence family

Pfam Protein family (Pfam)
PF00820
Domain description: Borrelia lipoprotein
Occurring in:
  1. Outer surface protein B
The deposited structure of PDB entry 1rjl contains 1 copy of Pfam domain PF00820 (Borrelia lipoprotein) in Outer surface protein B. Showing 1 copy in chain C.

InterPro InterPro annotations
IPR001809
Domain description: Outer surface lipoprotein, Borrelia
Occurring in:
  1. Outer surface protein B
IPR003597
Domain description: Immunoglobulin C1-set
Occurring in:
  1. Fab H6831 L-chain
  2. Fab H6831 H-chain
IPR013106
Domain description: Immunoglobulin V-set domain
Occurring in:
  1. Fab H6831 L-chain
  2. Fab H6831 H-chain
IPR036179
Domain description: Immunoglobulin-like domain superfamily
Occurring in:
  1. Fab H6831 L-chain
  2. Fab H6831 H-chain
IPR013783
Domain description: Immunoglobulin-like fold
Occurring in:
  1. Fab H6831 L-chain
  2. Fab H6831 H-chain
IPR007110
Domain description: Immunoglobulin-like domain
Occurring in:
  1. Fab H6831 L-chain
  2. Fab H6831 H-chain
IPR003599
Domain description: Immunoglobulin domain subtype
Occurring in:
  1. Fab H6831 L-chain
  2. Fab H6831 H-chain
IPR023322
Domain description: Outer surface lipoprotein domain superfamily
Occurring in:
  1. Outer surface protein B
IPR003006
Domain description: Immunoglobulin/major histocompatibility complex, conserved site
Occurring in:
  1. Fab H6831 L-chain

Structure domains

CATH CATH domains
2.60.40.10
Class: Mainly Beta
Architecture: Sandwich
Topology: Immunoglobulin-like
Homology: Immunoglobulins
Occurring in:
  1. Fab H6831 L-chain
  2. Fab H6831 H-chain
The deposited structure of PDB entry 1rjl contains 2 copies of CATH domain 2.60.40.10 (Immunoglobulin-like) in Fab H6831 L-chain. Showing 2 copies in chain A.
The deposited structure of PDB entry 1rjl contains 2 copies of CATH domain 2.60.40.10 (Immunoglobulin-like) in Fab H6831 H-chain. Showing 2 copies in chain B.
3.90.930.1
Class: Alpha Beta
Architecture: Alpha-Beta Complex
Topology: Outer Surface Protein A; domain 3
Homology: Outer Surface Protein A; domain 3
Occurring in:
  1. Outer surface protein B
The deposited structure of PDB entry 1rjl contains 1 copy of CATH domain 3.90.930.1 (Outer Surface Protein A; domain 3) in Outer surface protein B. Showing 1 copy in chain C.
SCOP SCOP annotations
48942
Class: All beta proteins
Fold: Immunoglobulin-like beta-sandwich
Superfamily: Immunoglobulin
Occurring in:
  1. Fab H6831 L-chain
  2. Fab H6831 H-chain
The deposited structure of PDB entry 1rjl contains 1 copy of SCOP domain 48942 (C1 set domains (antibody constant domain-like)) in Fab H6831 L-chain. Showing 1 copy in chain A.
The deposited structure of PDB entry 1rjl contains 1 copy of SCOP domain 48942 (C1 set domains (antibody constant domain-like)) in Fab H6831 H-chain. Showing 1 copy in chain B.
48727
Class: All beta proteins
Fold: Immunoglobulin-like beta-sandwich
Superfamily: Immunoglobulin
Occurring in:
  1. Fab H6831 L-chain
  2. Fab H6831 H-chain
The deposited structure of PDB entry 1rjl contains 1 copy of SCOP domain 48727 (V set domains (antibody variable domain-like)) in Fab H6831 L-chain. Showing 1 copy in chain A.
The deposited structure of PDB entry 1rjl contains 1 copy of SCOP domain 48727 (V set domains (antibody variable domain-like)) in Fab H6831 H-chain. Showing 1 copy in chain B.
51088
Class: All beta proteins
Fold: open-sided beta-meander
Superfamily: Outer surface protein
Occurring in:
  1. Outer surface protein B
The deposited structure of PDB entry 1rjl contains 1 copy of SCOP domain 51088 (Outer surface protein) in Outer surface protein B. Showing 1 copy in chain C.

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