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crystal structure of collagen IV NC1 domain from placenta basement membrane

Source organism: Bos taurus
Biochemical function: extracellular matrix structural constituent
Biological process: not assigned
Cellular component: collagen trimer

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GO terms

Biochemical function:
Biological process:
  • not assigned
Cellular component:

Sequence family

Pfam Protein family (Pfam)
PF01413
Domain description: C-terminal tandem repeated domain in type 4 procollagen
Occurring in:
  1. Arresten
  2. Collagen alpha-2(IV) chain
The deposited structure of PDB entry 1t61 contains 8 copies of Pfam domain PF01413 (C-terminal tandem repeated domain in type 4 procollagen) in Arresten. Showing 2 copies in chain E.
The deposited structure of PDB entry 1t61 contains 4 copies of Pfam domain PF01413 (C-terminal tandem repeated domain in type 4 procollagen) in Collagen alpha-2(IV) chain. Showing 2 copies in chain F.

InterPro InterPro annotations
IPR001442
Domain description: Collagen IV, non-collagenous
Occurring in:
  1. Arresten
  2. Collagen alpha-2(IV) chain
IPR016187
Domain description: C-type lectin fold
Occurring in:
  1. Arresten
  2. Collagen alpha-2(IV) chain
IPR019326
Domain description: Protein NDNF
Occurring in:
  1. Arresten
  2. Collagen alpha-2(IV) chain
IPR036954
Domain description: Collagen IV, non-collagenous domain superfamily
Occurring in:
  1. Arresten
  2. Collagen alpha-2(IV) chain

Structure domain

CATH CATH domain
2.170.240.10
Class: Mainly Beta
Architecture: Beta Complex
Topology: Noncollagenous (NC1) domain of collagen IV
Homology: Collagen IV, non-collagenous
Occurring in:
  1. Arresten
  2. Collagen alpha-2(IV) chain
The deposited structure of PDB entry 1t61 contains 4 copies of CATH domain 2.170.240.10 (Noncollagenous (NC1) domain of collagen IV) in Arresten. Showing 1 copy in chain D.
The deposited structure of PDB entry 1t61 contains 2 copies of CATH domain 2.170.240.10 (Noncollagenous (NC1) domain of collagen IV) in Collagen alpha-2(IV) chain. Showing 1 copy in chain C.
SCOP SCOP annotation
75585
Class: Alpha and beta proteins (a+b)
Fold: C-type lectin-like
Superfamily: C-type lectin-like
Occurring in:
  1. Arresten
  2. Collagen alpha-2(IV) chain
The deposited structure of PDB entry 1t61 contains 8 copies of SCOP domain 75585 (Noncollagenous (NC1) domain of collagen IV) in Arresten. Showing 2 copies in chain D.
The deposited structure of PDB entry 1t61 contains 4 copies of SCOP domain 75585 (Noncollagenous (NC1) domain of collagen IV) in Collagen alpha-2(IV) chain. Showing 2 copies in chain C.

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