Reviews - 1trw mentioned but not cited (1)
- Thioredoxin and thioredoxin target proteins: from molecular mechanisms to functional significance. Lee S, Kim SM, Lee RT. Antioxid Redox Signal 18 1165-1207 (2013)
Articles - 1trw mentioned but not cited (2)
- Benchmarking pK(a) prediction. Davies MN, Toseland CP, Moss DS, Flower DR. BMC Biochem 7 18 (2006)
- Extending the Stochastic Titration CpHMD to CHARMM36m. Sequeira JGN, Rodrigues FEP, Silva TGD, Reis PBPS, Machuqueiro M. J Phys Chem B 126 7870-7882 (2022)
Reviews citing this publication (15)
- Surprising similarities in structure comparison. Gibrat JF, Madej T, Bryant SH. Curr Opin Struct Biol 6 377-385 (1996)
- Thioredoxin and related molecules--from biology to health and disease. Lillig CH, Holmgren A. Antioxid Redox Signal 9 25-47 (2007)
- Repression of gene expression by oxidative stress. Morel Y, Barouki R. Biochem J 342 Pt 3 481-496 (1999)
- Thioredoxin structure and mechanism: conformational changes on oxidation of the active-site sulfhydryls to a disulfide. Holmgren A. Structure 3 239-243 (1995)
- Structure, function, and mechanism of thioredoxin proteins. Collet JF, Messens J. Antioxid Redox Signal 13 1205-1216 (2010)
- Properties and biological activities of thioredoxins. Powis G, Montfort WR. Annu Rev Biophys Biomol Struct 30 421-455 (2001)
- Properties and biological activities of thioredoxins. Powis G, Montfort WR. Annu Rev Pharmacol Toxicol 41 261-295 (2001)
- Structure and function of the radical enzyme ribonucleotide reductase. Eklund H, Uhlin U, Färnegårdh M, Logan DT, Nordlund P. Prog Biophys Mol Biol 77 177-268 (2001)
- Understanding the pK(a) of redox cysteines: the key role of hydrogen bonding. Roos G, Foloppe N, Messens J. Antioxid Redox Signal 18 94-127 (2013)
- Thioredoxin-1 and posttranslational modifications. Haendeler J. Antioxid Redox Signal 8 1723-1728 (2006)
- Extracellular Thiol Isomerases and Their Role in Thrombus Formation. Schulman S, Bendapudi P, Sharda A, Chen V, Bellido-Martin L, Jasuja R, Furie BC, Flaumenhaft R, Furie B. Antioxid Redox Signal 24 1-15 (2016)
- Vascular thiol isomerases. Flaumenhaft R, Furie B. Blood 128 893-901 (2016)
- Structures of protein complexes by multidimensional heteronuclear magnetic resonance spectroscopy. Gronenborn AM, Clore GM. Crit Rev Biochem Mol Biol 30 351-385 (1995)
- Regulatory role of thiol isomerases in thrombus formation. Sharda A, Furie B. Expert Rev Hematol 11 437-448 (2018)
- Molecular views of redox regulation: three-dimensional structures of redox regulatory proteins and protein complexes. Qin J, Yang Y, Velyvis A, Gronenborn A. Antioxid Redox Signal 2 827-840 (2000)
Articles citing this publication (78)
- AP-1 transcriptional activity is regulated by a direct association between thioredoxin and Ref-1. Hirota K, Matsui M, Iwata S, Nishiyama A, Mori K, Yodoi J. Proc Natl Acad Sci U S A 94 3633-3638 (1997)
- Solution structure of calcium-free calmodulin. Kuboniwa H, Tjandra N, Grzesiek S, Ren H, Klee CB, Bax A. Nat Struct Biol 2 768-776 (1995)
- Crystal structures of reduced, oxidized, and mutated human thioredoxins: evidence for a regulatory homodimer. Weichsel A, Gasdaska JR, Powis G, Montfort WR. Structure 4 735-751 (1996)
- The interaction of thioredoxin with Txnip. Evidence for formation of a mixed disulfide by disulfide exchange. Patwari P, Higgins LJ, Chutkow WA, Yoshioka J, Lee RT. J Biol Chem 281 21884-21891 (2006)
- Thioredoxin catalyzes the S-nitrosation of the caspase-3 active site cysteine. Mitchell DA, Marletta MA. Nat Chem Biol 1 154-158 (2005)
- High-resolution solution structures of oxidized and reduced Escherichia coli thioredoxin. Jeng MF, Campbell AP, Begley T, Holmgren A, Case DA, Wright PE, Dyson HJ. Structure 2 853-868 (1994)
- Probing the chemistry of thioredoxin catalysis with force. Wiita AP, Perez-Jimenez R, Walther KA, Gräter F, Berne BJ, Holmgren A, Sanchez-Ruiz JM, Fernandez JM. Nature 450 124-127 (2007)
- Binding of allosteric effectors to ribonucleotide reductase protein R1: reduction of active-site cysteines promotes substrate binding. Eriksson M, Uhlin U, Ramaswamy S, Ekberg M, Regnström K, Sjöberg BM, Eklund H. Structure 5 1077-1092 (1997)
- Solution structure of human thioredoxin in a mixed disulfide intermediate complex with its target peptide from the transcription factor NF kappa B. Qin J, Clore GM, Kennedy WM, Huth JR, Gronenborn AM. Structure 3 289-297 (1995)
- Improving the quality of NMR and crystallographic protein structures by means of a conformational database potential derived from structure databases. Kuszewski J, Gronenborn AM, Clore GM. Protein Sci 5 1067-1080 (1996)
- A single dipeptide sequence modulates the redox properties of a whole enzyme family. Huber-Wunderlich M, Glockshuber R. Fold Des 3 161-171 (1998)
- Characterization of Escherichia coli thioredoxin variants mimicking the active-sites of other thiol/disulfide oxidoreductases. Mössner E, Huber-Wunderlich M, Glockshuber R. Protein Sci 7 1233-1244 (1998)
- Thiol-disulfide exchange is involved in the catalytic mechanism of peptide methionine sulfoxide reductase. Lowther WT, Brot N, Weissbach H, Honek JF, Matthews BW. Proc Natl Acad Sci U S A 97 6463-6468 (2000)
- Crystal structures of reduced and oxidized DsbA: investigation of domain motion and thiolate stabilization. Guddat LW, Bardwell JC, Martin JL. Structure 6 757-767 (1998)
- Thioredoxin is required for S-nitrosation of procaspase-3 and the inhibition of apoptosis in Jurkat cells. Mitchell DA, Morton SU, Fernhoff NB, Marletta MA. Proc Natl Acad Sci U S A 104 11609-11614 (2007)
- The solution structure of human thioredoxin complexed with its target from Ref-1 reveals peptide chain reversal. Qin J, Clore GM, Kennedy WP, Kuszewski J, Gronenborn AM. Structure 4 613-620 (1996)
- Sensing and signaling of oxidative stress in chloroplasts by inactivation of the SAL1 phosphoadenosine phosphatase. Chan KX, Mabbitt PD, Phua SY, Mueller JW, Nisar N, Gigolashvili T, Stroeher E, Grassl J, Arlt W, Estavillo GM, Jackson CJ, Pogson BJ. Proc Natl Acad Sci U S A 113 E4567-76 (2016)
- Crystal structure of reduced thioredoxin reductase from Escherichia coli: structural flexibility in the isoalloxazine ring of the flavin adenine dinucleotide cofactor. Lennon BW, Williams CH, Ludwig ML. Protein Sci 8 2366-2379 (1999)
- Truncated thioredoxin is a mitogenic cytokine for resting human peripheral blood mononuclear cells and is present in human plasma. Pekkari K, Gurunath R, Arner ES, Holmgren A. J Biol Chem 275 37474-37480 (2000)
- Thioredoxin expression and localization in human cell lines: detection of full-length and truncated species. Sahaf B, Söderberg A, Spyrou G, Barral AM, Pekkari K, Holmgren A, Rosén A. Exp Cell Res 236 181-192 (1997)
- Structure, dynamics and electrostatics of the active site of glutaredoxin 3 from Escherichia coli: comparison with functionally related proteins. Foloppe N, Sagemark J, Nordstrand K, Berndt KD, Nilsson L. J Mol Biol 310 449-470 (2001)
- Thioredoxin fold as homodimerization module in the putative chaperone ERp29: NMR structures of the domains and experimental model of the 51 kDa dimer. Liepinsh E, Baryshev M, Sharipo A, Ingelman-Sundberg M, Otting G, Mkrtchian S. Structure 9 457-471 (2001)
- AP-1 DNA-binding activity is inhibited by selenite and selenodiglutathione. Spyrou G, Björnstedt M, Kumar S, Holmgren A. FEBS Lett 368 59-63 (1995)
- Crystal structure of Arabidopsis thaliana NADPH dependent thioredoxin reductase at 2.5 A resolution. Dai S, Saarinen M, Ramaswamy S, Meyer Y, Jacquot JP, Eklund H. J Mol Biol 264 1044-1057 (1996)
- The NMR solution structure of human glutaredoxin in the fully reduced form. Sun C, Berardi MJ, Bushweller JH. J Mol Biol 280 687-701 (1998)
- Mechanochemistry: one bond at a time. Liang J, Fernández JM. ACS Nano 3 1628-1645 (2009)
- Nuclear redox-signaling is essential for apoptosis inhibition in endothelial cells--important role for nuclear thioredoxin-1. Schroeder P, Popp R, Wiegand B, Altschmied J, Haendeler J. Arterioscler Thromb Vasc Biol 27 2325-2331 (2007)
- Structure of TcpG, the DsbA protein folding catalyst from Vibrio cholerae. Hu SH, Peek JA, Rattigan E, Taylor RK, Martin JL. J Mol Biol 268 137-146 (1997)
- Cyclopentenone prostaglandin-induced unfolding and aggregation of the Parkinson disease-associated UCH-L1. Koharudin LM, Liu H, Di Maio R, Kodali RB, Graham SH, Gronenborn AM. Proc Natl Acad Sci U S A 107 6835-6840 (2010)
- The Arabidopsis thaliana genome encodes at least four thioredoxins m and a new prokaryotic-like thioredoxin. Mestres-Ortega D, Meyer Y. Gene 240 307-316 (1999)
- A molecular model for the redox potential difference between thioredoxin and DsbA, based on electrostatics calculations. Gane PJ, Freedman RB, Warwicker J. J Mol Biol 249 376-387 (1995)
- The glutaredoxin -C-P-Y-C- motif: influence of peripheral residues. Foloppe N, Nilsson L. Structure 12 289-300 (2004)
- Binary reducing equivalent pathways using NADPH-thioredoxin reductase and ferredoxin-thioredoxin reductase in the cyanobacterium Synechocystis sp. strain PCC 6803. Hishiya S, Hatakeyama W, Mizota Y, Hosoya-Matsuda N, Motohashi K, Ikeuchi M, Hisabori T. Plant Cell Physiol 49 11-18 (2008)
- Crystal structure of the wild-type and D30A mutant thioredoxin h of Chlamydomonas reinhardtii and implications for the catalytic mechanism. Menchise V, Corbier C, Didierjean C, Saviano M, Benedetti E, Jacquot JP, Aubry A. Biochem J 359 65-75 (2001)
- Direct NMR observation of the Cys-14 thiol proton of reduced Escherichia coli glutaredoxin-3 supports the presence of an active site thiol-thiolate hydrogen bond. Nordstrand K, Aslund F, Meunier S, Holmgren A, Otting G, Berndt KD. FEBS Lett 449 196-200 (1999)
- Crystal structure of thioredoxin-2 from Anabaena. Saarinen M, Gleason FK, Eklund H. Structure 3 1097-1108 (1995)
- Molecular cloning and expression of a cDNA encoding a human thioredoxin-like protein. Miranda-Vizuete A, Gustafsson JA, Spyrou G. Biochem Biophys Res Commun 243 284-288 (1998)
- X-ray structures of thioredoxin and thioredoxin reductase from Entamoeba histolytica and prevailing hypothesis of the mechanism of Auranofin action. Parsonage D, Sheng F, Hirata K, Debnath A, McKerrow JH, Reed SL, Abagyan R, Poole LB, Podust LM. J Struct Biol 194 180-190 (2016)
- Comparative structural analysis of oxidized and reduced thioredoxin from Drosophila melanogaster. Wahl MC, Irmler A, Hecker B, Schirmer RH, Becker K. J Mol Biol 345 1119-1130 (2005)
- NMR structure of oxidized glutaredoxin 3 from Escherichia coli. Nordstrand K, Sandström A, Aslund F, Holmgren A, Otting G, Berndt KD. J Mol Biol 303 423-432 (2000)
- Chloroplast thioredoxin mutants without active-site cysteines facilitate the reduction of the regulatory disulphide bridge on the gamma-subunit of chloroplast ATP synthase. Stumpp MT, Motohashi K, Hisabori T. Biochem J 341 ( Pt 1) 157-163 (1999)
- Mechanism of substrate specificity in Bacillus subtilis ResA, a thioredoxin-like protein involved in cytochrome c maturation. Colbert CL, Wu Q, Erbel PJ, Gardner KH, Deisenhofer J. Proc Natl Acad Sci U S A 103 4410-4415 (2006)
- Biophysical and structural characterization of the thioredoxin-binding domain of protein kinase ASK1 and its interaction with reduced thioredoxin. Kosek D, Kylarova S, Psenakova K, Rezabkova L, Herman P, Vecer J, Obsilova V, Obsil T. J Biol Chem 289 24463-24474 (2014)
- Crystal structures of oxidized and reduced forms of human mitochondrial thioredoxin 2. Smeets A, Evrard C, Landtmeters M, Marchand C, Knoops B, Declercq JP. Protein Sci 14 2610-2621 (2005)
- NMR solution structure of an oxidised thioredoxin h from the eukaryotic green alga Chlamydomonas reinhardtii. Mittard V, Blackledge MJ, Stein M, Jacquot JP, Marion D, Lancelin JM. Eur J Biochem 243 374-383 (1997)
- Position-dependent interactions between cysteine residues and the helix dipole. Miranda JJ. Protein Sci 12 73-81 (2003)
- Filtering and selection of structural models: combining docking and NMR. Dobrodumov A, Gronenborn AM. Proteins 53 18-32 (2003)
- Stabilization of the catalytic thiolate in a mammalian glutaredoxin: structure, dynamics and electrostatics of reduced pig glutaredoxin and its mutants. Foloppe N, Nilsson L. J Mol Biol 372 798-816 (2007)
- Crystal structure of the catalytic domain of a human thioredoxin-like protein. Jin J, Chen X, Zhou Y, Bartlam M, Guo Q, Liu Y, Sun Y, Gao Y, Ye S, Li G, Rao Z, Qiang B, Yuan J. Eur J Biochem 269 2060-2068 (2002)
- Cysteine residues mediate high-affinity binding of thioredoxin to ASK1. Kylarova S, Kosek D, Petrvalska O, Psenakova K, Man P, Vecer J, Herman P, Obsilova V, Obsil T. FEBS J 283 3821-3838 (2016)
- Is human thioredoxin monomeric or dimeric? Gronenborn AM, Clore GM, Louis JM, Wingfield PT. Protein Sci 8 426-429 (1999)
- Structural comparison of oxidized and reduced FKBP13 from Arabidopsis thaliana. Gopalan G, He Z, Battaile KP, Luan S, Swaminathan K. Proteins 65 789-795 (2006)
- The structure of a reduced mutant T4 glutaredoxin. Ingelman M, Nordlund P, Eklund H. FEBS Lett 370 209-211 (1995)
- NMR structures of thioredoxin m from the green alga Chlamydomonas reinhardtii. Lancelin JM, Guilhaudis L, Krimm I, Blackledge MJ, Marion D, Jacquot JP. Proteins 41 334-349 (2000)
- NMR solution structure of a novel thioredoxin from Bacillus acidocaldarius possible determinants of protein stability. Nicastro G, De Chiara C, Pedone E, Tatò M, Rossi M, Bartolucci S. Eur J Biochem 267 403-413 (2000)
- Measuring H2O2 produced in response to cell surface receptor activation. Rhee SG. Nat Chem Biol 3 244-246 (2007)
- Optimizing doped libraries by using genetic algorithms. Tomandl D, Schober A, Schwienhorst A. J Comput Aided Mol Des 11 29-38 (1997)
- The Redox State Regulates the Conformation of Rv2466c to Activate the Antitubercular Prodrug TP053. Albesa-Jové D, Comino N, Tersa M, Mohorko E, Urresti S, Dainese E, Chiarelli LR, Pasca MR, Manganelli R, Makarov V, Riccardi G, Svergun DI, Glockshuber R, Guerin ME. J Biol Chem 290 31077-31089 (2015)
- 1H, 13C, 15N-NMR resonance assignments of oxidized thioredoxin h from the eukaryotic green alga Chlamydomonas reinhardtii using new methods based on two-dimensional triple-resonance NMR spectroscopy and computer-assisted backbone assignment. Mittard V, Morelle N, Brutscher B, Simorre JP, Marion D, Stein M, Jacquot JP, Lirsac PN, Lancelin JM. Eur J Biochem 229 473-485 (1995)
- Compact reduced thioredoxin structure from the thermophilic bacteria Thermus thermophilus. Rehse PH, Kumei M, Tahirov TH. Proteins 61 1032-1037 (2005)
- Differences between the electronic environments of reduced and oxidized Escherichia coli DsbA inferred from heteronuclear magnetic resonance spectroscopy. Couprie J, Remerowski ML, Bailleul A, Courçon M, Gilles N, Quéméneur E, Jamin N. Protein Sci 7 2065-2080 (1998)
- NMR solution structure of the reduced form of thioredoxin 2 from Saccharomyces cerevisiae. Amorim GC, Pinheiro AS, Netto LE, Valente AP, Almeida FC. J Biomol NMR 38 99-104 (2007)
- Complete 1H, 13C, and 15N NMR resonance assignments and secondary structure of human glutaredoxin in the fully reduced form. Sun C, Holmgren A, Bushweller JH. Protein Sci 6 383-390 (1997)
- Solution structures of Mycobacterium tuberculosis thioredoxin C and models of intact thioredoxin system suggest new approaches to inhibitor and drug design. Olson AL, Neumann TS, Cai S, Sem DS. Proteins 81 675-689 (2013)
- Chemically accurate protein structures: validation of protein NMR structures by comparison of measured and predicted pKa values. Powers N, Jensen JH. J Biomol NMR 35 39-51 (2006)
- Structural and Biochemical Insights into the Reactivity of Thioredoxin h1 from Chlamydomonas reinhardtii. Marchand CH, Fermani S, Rossi J, Gurrieri L, Tedesco D, Henri J, Sparla F, Trost P, Lemaire SD, Zaffagnini M. Antioxidants (Basel) 8 E10 (2019)
- An extended active-site motif controls the reactivity of the thioredoxin fold. Mavridou DA, Saridakis E, Kritsiligkou P, Mozley EC, Ferguson SJ, Redfield C. J Biol Chem 289 8681-8696 (2014)
- Molecular dynamics simulations of thioredoxin with S-glutathiolated cysteine-73. Han S. Biochem Biophys Res Commun 362 532-537 (2007)
- Purification and characterization of delta3Trx-1, a splicing variant of human thioredoxin-1 lacking exon 3. Jiménez A, Miranda-Vizuete A. Protein Expr Purif 27 319-324 (2003)
- Recognition between a short unstructured peptide and a partially folded fragment leads to the thioredoxin fold sharing native-like dynamics. Binolfi A, Fernández CO, Sica MP, Delfino JM, Santos J. Proteins 80 1448-1464 (2012)
- Minithioredoxin: a folded and functional peptide fragment of thioredoxin. Ghoshal AK. Biochem Biophys Res Commun 261 676-681 (1999)
- On the Quaternary Assembly of Spinach Chloroplast Thioredoxin m. Capitani G, Schürmann P. Photosynth Res 79 281-285 (2004)
- The impact of ionic mercury on antioxidant defenses in two mercury-sensitive anaerobic bacteria. Wang Y, Robison T, Wiatrowski H. Biometals 26 1023-1031 (2013)
- Binding of phenothiazines into allosteric hydrophobic pocket of human thioredoxin 1. Philot EA, da Mata Lopes D, de Souza AT, Braz AS, Nantes IL, Rodrigues T, Perahia D, Miteva MA, Scott LP. Eur Biophys J 45 279-286 (2016)
- Purification and biochemical characterization of an organic-solvent-tolerant thioredoxin from dromedary pancreas. Ben Bacha AG, Ben Bacha AG, Mejdoub H. Protein J 31 1-7 (2012)
- Truncated Escherichia coli thioredoxin induces proliferation of human blood mononuclear cells and production of reactive oxygen species as well as proinflammatory cytokines. Liu SY, Liu IC, Lin TY. Cell Biochem Funct 34 226-232 (2016)
- Crystal structure of thioredoxin 1 from Cryptococcus neoformans at 1.8 Å resolution shows unexpected plasticity of the loop preceding the catalytic site. Bravo-Chaucanés CP, Abadio AKR, Kioshima ÉS, Felipe MSS, Barbosa JARG. Biochem Biophys Rep 21 100724 (2020)
- Inhibition of Thermus thermophilus HB8 thioredoxin activity by platinum(II). Kato M, Yamamoto H, Okamura TA, Maoka N, Masui R, Kuramitsu S, Ueyama N. Dalton Trans 1023-1026 (2005)