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Solution structure of the Ubl-domain of Herp

Source organism: Homo sapiens
Biochemical function: not assigned
Biological process: not assigned
Cellular component: not assigned

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GO terms

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned

Sequence family

Pfam Protein family (Pfam)
PF00240
Domain description: Ubiquitin family
Occurring in:
  1. Homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 1 protein
The deposited structure of PDB entry 1wgd contains 1 copy of Pfam domain PF00240 (Ubiquitin family) in Homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 1 protein. Showing 1 copy in chain A.

InterPro InterPro annotations
IPR000626
Domain description: Ubiquitin-like domain
Occurring in:
  1. Homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 1 protein
IPR039751
Domain description: Homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 1 /2
Occurring in:
  1. Homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 1 protein
IPR029071
Domain description: Ubiquitin-like domain superfamily
Occurring in:
  1. Homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 1 protein

Structure domain

CATH CATH domain
3.10.20.90
Class: Alpha Beta
Architecture: Roll
Topology: Ubiquitin-like (UB roll)
Homology: Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1
Occurring in:
  1. Homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 1 protein
The deposited structure of PDB entry 1wgd contains 1 copy of CATH domain 3.10.20.90 (Ubiquitin-like (UB roll)) in Homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 1 protein. Showing 1 copy in chain A.
SCOP SCOP annotation
54237
Class: Alpha and beta proteins (a+b)
Fold: beta-Grasp (ubiquitin-like)
Superfamily: Ubiquitin-like
Occurring in:
  1. Homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 1 protein
The deposited structure of PDB entry 1wgd contains 1 copy of SCOP domain 54237 (Ubiquitin-related) in Homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 1 protein. Showing 1 copy in chain A.

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