Function and Biology

Crystal structure of the rNGFI-B ligand-binding domain

Source organism: Rattus norvegicus
Biochemical function: nuclear receptor activity
Biological process: regulation of DNA-templated transcription
Cellular component: nucleus

GO terms

Biochemical function:
Biological process:
Cellular component:

Sequence family

Pfam Protein family (Pfam)
PF00104
Domain description: Ligand-binding domain of nuclear hormone receptor
Occurring in:
  1. Nuclear receptor subfamily 4 group A member 1
The deposited structure of PDB entry 1yje contains 1 copy of Pfam domain PF00104 (Ligand-binding domain of nuclear hormone receptor) in Nuclear receptor subfamily 4 group A member 1. Showing 1 copy in chain A.

InterPro InterPro annotations
IPR003070
Domain description: Nuclear receptor subfamily 4 group A member 1-3
Occurring in:
  1. Nuclear receptor subfamily 4 group A member 1
IPR001723
Domain description: Nuclear hormone receptor
Occurring in:
  1. Nuclear receptor subfamily 4 group A member 1
IPR000536
Domain description: Nuclear hormone receptor, ligand-binding domain
Occurring in:
  1. Nuclear receptor subfamily 4 group A member 1
IPR003071
Domain description: Nuclear receptor subfamily 4 group A member 1
Occurring in:
  1. Nuclear receptor subfamily 4 group A member 1
IPR035500
Domain description: Nuclear hormone receptor-like domain superfamily
Occurring in:
  1. Nuclear receptor subfamily 4 group A member 1
IPR036393
Domain description: Acetylglutamate kinase-like superfamily
Occurring in:
  1. Nuclear receptor subfamily 4 group A member 1

Structure domain

CATH CATH domain
1.10.565.10
Class: Mainly Alpha
Architecture: Orthogonal Bundle
Topology: Retinoid X Receptor
Homology: Retinoid X Receptor
Occurring in:
  1. Nuclear receptor subfamily 4 group A member 1
The deposited structure of PDB entry 1yje contains 1 copy of CATH domain 1.10.565.10 (Retinoid X Receptor) in Nuclear receptor subfamily 4 group A member 1. Showing 1 copy in chain A.