› 2cdv

X-ray diffraction
1.8Å resolution

REFINED STRUCTURE OF CYTOCHROME C3 AT 1.8 ANGSTROMS RESOLUTION

Released:
DOI: 10.2210/pdb2cdv/pdb
PDB entry 2cdv coloured by chain, front view.
PDB entry 2cdv coloured by chain, side view.
PDB entry 2cdv coloured by chain, top view.
Source organism: Desulfovibrio vulgaris
Primary publication:
Refined structure of cytochrome c3 at 1.8 A resolution.
Higuchi Y, Kusunoki M, Matsuura Y, Yasuoka N, Kakudo M
J Mol Biol 172 109-39 (1984)
PMID: 6319712

Function and Biology Details

Biochemical function:
Biological process:
Cellular component:
Sequence domains:
Structure domain:

Structure analysis Details

Assembly composition:
monomeric (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-132281 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Cytochrome c3 Chain: A
Molecule details ›
Chain: A
Length: 107 amino acids
Theoretical weight: 11.56 KDa
Source organism: Desulfovibrio vulgaris
Expression system: Not provided
UniProt:
  • Canonical: P00132 (Residues: 24-130; Coverage: 100%)
Gene name: DvMF_2499
Sequence domains: Class III cytochrome C family
Structure domains: Cytochrome C3

Ligands and Environments

1 bound ligand:
Ligand HEC 4 x HEC
No modified residues

Experiments and Validation Details

Entry percentile scores
Spacegroup: P212121
Unit cell:
a: 52.9Å b: 68.1Å c: 34.9Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.176 0.176 not available
Expression system: Not provided

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Citations

14 review citations

Metalloproteins containing cytochrome, iron-sulfur, or copper redox centers.
Liu et al. (2014)
13 more

10 mentions without citation

Bacterial Haemoprotein Sensors of NO: H-NOX and NosP.
Bacon et al. (2017)
9 more