› 2kjl

Solution NMR

NMR structures of a designed Cyanovirin-N homolog lectin; LKAMG

Released:
DOI: 10.2210/pdb2kjl/pdb
PDB entry 2kjl coloured by chain, ensemble of 30 models, front view.
PDB entry 2kjl coloured by chain, ensemble of 30 models, side view.
PDB entry 2kjl coloured by chain, ensemble of 30 models, top view.
Source organisms:
Primary publication:
The evolutionarily conserved family of cyanovirin-N homologs: structures and carbohydrate specificity.
Koharudin LM, Viscomi AR, Jee JG, Ottonello S, Gronenborn AM
Structure 16 570-84 (2008)
PMID: 18400178

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned
Sequence domains:

Structure analysis Details

Assembly composition:
monomeric (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-177613 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Cyanovirin-N homolog Chain: A
Molecule details ›
Chain: A
Length: 110 amino acids
Theoretical weight: 12.39 KDa
Source organisms: Expression system: Escherichia coli
UniProt:
  • Canonical: Q5MK11 (Residues: 1-39, 91-103; Coverage: 51%)
  • Canonical: Q7S6U4 (Residues: 42-96; Coverage: 50%)
Gene name: NCU05495
Sequence domains: CVNH domain
Structure domains: Cyanovirin-N

Ligands and Environments

No bound ligands
No modified residues

Experiments and Validation Details

Entry percentile scores
Chemical shift assignment: 73%
Refinement method: CNS simulated annealing
Expression system: Escherichia coli

Quick links

Citations

8 review citations

Glycan microarrays for decoding the glycome.
Rillahan et al. (2011)
7 more

1 mention without citation

A designed chimeric cyanovirin-N homolog lectin: structure and molecular basis of sucrose binding.
Koharudin et al. (2009)