› 2mn2

Solution NMR

3D structure of YmoB, a modulator of biofilm formation

Released:
DOI: 10.2210/pdb2mn2/pdb
PDB entry 2mn2 coloured by chain, ensemble of 20 models, front view.
PDB entry 2mn2 coloured by chain, ensemble of 20 models, side view.
PDB entry 2mn2 coloured by chain, ensemble of 20 models, top view.
Source organism: Yersinia enterocolitica
Primary publication:
An oxygen-sensitive toxin-antitoxin system.
Marimon O, Teixeira JM, Cordeiro TN, Soo VW, Wood TL, Mayzel M, Amata I, García J, Morera A, Gay M, Vilaseca M, Orekhov VY, Wood TK, Pons M
OpenAccess logo Nat Commun 7 13634 (2016)
PMID: 27929062

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned
Sequence domain:

Structure analysis Details

Assembly composition:
monomeric (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-101177 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Hha toxicity modulator TomB Chain: A
Molecule details ›
Chain: A
Length: 133 amino acids
Theoretical weight: 15.51 KDa
Source organism: Yersinia enterocolitica
Expression system: Escherichia coli BL21(DE3)
UniProt:
  • Canonical: A0A0E1NKQ3 (Residues: 1-122; Coverage: 100%)
Gene names: ERS137941_00299, I6I39_13575, tomB
Sequence domains: Biofilm formation regulator YbaJ

Ligands and Environments

No bound ligands
No modified residues

Experiments and Validation Details

wwPDB Validation report is not available for this NMR entry.
Chemical shift assignment: 90%
Refinement method: Simulated annealing molecular dynamics, simulated annealing
Expression system: Escherichia coli BL21(DE3)

Quick links

Citations

12 review citations

Biology and evolution of bacterial toxin-antitoxin systems.
Jurėnas et al. (2022)
11 more

3 mentions without citation

An oxygen-sensitive toxin-antitoxin system.
Marimon et al. (2016)
2 more