Function and Biology

Subcomplex of the stator of bovine mitochondrial ATP synthase

Sequence families

Pfam Protein families (Pfam)
PF05511
Domain description: Mitochondrial ATP synthase coupling factor 6
Occurring in:
  1. ATP synthase-coupling factor 6, mitochondrial
The deposited structure of PDB entry 2cly contains 2 copies of Pfam domain PF05511 (Mitochondrial ATP synthase coupling factor 6) in ATP synthase-coupling factor 6, mitochondrial. Showing 1 copy in chain C.

PF05873
Domain description: ATP synthase D chain, mitochondrial (ATP5H)
Occurring in:
  1. ATP synthase subunit d, mitochondrial
The deposited structure of PDB entry 2cly contains 2 copies of Pfam domain PF05873 (ATP synthase D chain, mitochondrial (ATP5H)) in ATP synthase subunit d, mitochondrial. Showing 1 copy in chain E.

PF05405
Domain description: Mitochondrial ATP synthase B chain precursor (ATP-synt_B)
Occurring in:
  1. ATP synthase F(0) complex subunit B1, mitochondrial
The deposited structure of PDB entry 2cly contains 2 copies of Pfam domain PF05405 (Mitochondrial ATP synthase B chain precursor (ATP-synt_B)) in ATP synthase F(0) complex subunit B1, mitochondrial. Showing 1 copy in chain A.

InterPro InterPro annotations
IPR008387
Domain description: ATP synthase-coupling factor 6, mitochondrial
Occurring in:
  1. ATP synthase-coupling factor 6, mitochondrial
IPR008689
Domain description: ATP synthase, F0 complex, subunit D, mitochondrial
Occurring in:
  1. ATP synthase subunit d, mitochondrial
IPR036204
Domain description: ATP synthase-coupling factor 6 superfamily, mitochondrial
Occurring in:
  1. ATP synthase-coupling factor 6, mitochondrial
IPR036228
Domain description: ATP synthase, F0 complex, subunit D superfamily, mitochondrial
Occurring in:
  1. ATP synthase subunit d, mitochondrial
IPR008688
Domain description: ATP synthase, F0 complex, subunit B/MI25
Occurring in:
  1. ATP synthase F(0) complex subunit B1, mitochondrial
IPR013837
Domain description: ATP synthase, F0 complex, subunit B
Occurring in:
  1. ATP synthase F(0) complex subunit B1, mitochondrial

Structure domains

CATH CATH domains
6.10.280.200
Class: Special
Architecture: Helix non-globular
Topology: Methane Monooxygenase Hydroxylase; Chain G, domain 1
Homology: Methane Monooxygenase Hydroxylase; Chain G, domain 1
Occurring in:
  1. ATP synthase-coupling factor 6, mitochondrial
The deposited structure of PDB entry 2cly contains 2 copies of CATH domain 6.10.280.200 (Methane Monooxygenase Hydroxylase; Chain G, domain 1) in ATP synthase-coupling factor 6, mitochondrial. Showing 1 copy in chain C.
6.10.280.70
Class: Special
Architecture: Helix non-globular
Topology: Methane Monooxygenase Hydroxylase; Chain G, domain 1
Homology: Methane Monooxygenase Hydroxylase; Chain G, domain 1
Occurring in:
  1. ATP synthase subunit d, mitochondrial
The deposited structure of PDB entry 2cly contains 2 copies of CATH domain 6.10.280.70 (Methane Monooxygenase Hydroxylase; Chain G, domain 1) in ATP synthase subunit d, mitochondrial. Showing 1 copy in chain E.
1.20.5.2210
Class: Mainly Alpha
Architecture: Up-down Bundle
Topology: Single alpha-helices involved in coiled-coils or other helix-helix interfaces
Homology: Single alpha-helices involved in coiled-coils or other helix-helix interfaces
Occurring in:
  1. ATP synthase F(0) complex subunit B1, mitochondrial
The deposited structure of PDB entry 2cly contains 2 copies of CATH domain 1.20.5.2210 (Single alpha-helices involved in coiled-coils or other helix-helix interfaces) in ATP synthase F(0) complex subunit B1, mitochondrial. Showing 1 copy in chain A.
SCOP SCOP annotations
111358
Class: Membrane and cell surface proteins and peptides
Fold: Mitochondrial ATP synthase coupling factor 6
Superfamily: Mitochondrial ATP synthase coupling factor 6
Occurring in:
  1. ATP synthase-coupling factor 6, mitochondrial
The deposited structure of PDB entry 2cly contains 2 copies of SCOP domain 111358 (Mitochondrial ATP synthase coupling factor 6) in ATP synthase-coupling factor 6, mitochondrial. Showing 1 copy in chain C.
161066
Class: Membrane and cell surface proteins and peptides
Fold: ATP synthase D chain-like
Superfamily: ATP synthase D chain-like
Occurring in:
  1. ATP synthase subunit d, mitochondrial
The deposited structure of PDB entry 2cly contains 2 copies of SCOP domain 161066 (ATP synthase D chain-like) in ATP synthase subunit d, mitochondrial. Showing 1 copy in chain E.
161061
Class: Membrane and cell surface proteins and peptides
Fold: ATP synthase B chain-like
Superfamily: ATP synthase B chain-like
Occurring in:
  1. ATP synthase F(0) complex subunit B1, mitochondrial
The deposited structure of PDB entry 2cly contains 2 copies of SCOP domain 161061 (ATP synthase B chain-like) in ATP synthase F(0) complex subunit B1, mitochondrial. Showing 1 copy in chain A.