2db4

X-ray diffraction
2.4Å resolution

Crystal structure of rotor ring with DCCD of the V- ATPase from Enterococcus hirae

Released:

Function and Biology Details

Structure analysis Details

Assembly composition:
homo decamer (preferred)
PDBe Complex ID:
PDB-CPX-545448 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
V-type sodium ATPase subunit K Chains: A, B, C, D, E, F, G, H, I, J
Molecule details ›
Chains: A, B, C, D, E, F, G, H, I, J
Length: 156 amino acids
Theoretical weight: 16.04 KDa
Source organism: Enterococcus hirae
Expression system: Enterococcus hirae
UniProt:
  • Canonical: P43457 (Residues: 1-156; Coverage: 100%)
Gene names: EHR_08240, ntpK, ntpN
Sequence domains: ATP synthase subunit C
Structure domains: lithium bound rotor ring of v- atpase

Ligands and Environments

No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: SPRING-8 BEAMLINE BL26B1
Spacegroup: P212121
Unit cell:
a: 120.214Å b: 125.229Å c: 211.577Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.225 0.225 0.231
Expression system: Enterococcus hirae