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Structural basis of the initial binding of tRNA(Ile) lysidine synthetase TilS with ATP and L-lysine

Kuratani M, Yoshikawa Y, Bessho Y, Higashijima K, Ishii T, Shibata R, Takahashi S, Yutani K, Yokoyama S
To be published
Cited: 19 times

Reviews - 2e89 mentioned but not cited (1)

  1. Convergent evolution of AUA decoding in bacteria and archaea. Suzuki T, Numata T. RNA Biol 11 1586-1596 (2014)

Articles - 2e89 mentioned but not cited (2)

  1. Nonredox thiolation in tRNA occurring via sulfur activation by a [4Fe-4S] cluster. Arragain S, Bimai O, Legrand P, Caillat S, Ravanat JL, Touati N, Binet L, Atta M, Fontecave M, Golinelli-Pimpaneau B. Proc. Natl. Acad. Sci. U.S.A. 114 7355-7360 (2017)
  2. Distinct Conformation of ATP Molecule in Solution and on Protein. Kobayashi E, Yura K, Nagai Y. Biophysics (Nagoya-shi) 9 1-12 (2013)


Reviews citing this publication (6)

  1. Discovery and characterization of tRNAIle lysidine synthetase (TilS). Suzuki T, Miyauchi K. FEBS Lett. 584 272-277 (2010)
  2. Structure, dynamics, and function of RNA modification enzymes. Ishitani R, Yokoyama S, Nureki O. Curr. Opin. Struct. Biol. 18 330-339 (2008)
  3. Transfer RNA Modification Enzymes from Thermophiles and Their Modified Nucleosides in tRNA. Hori H, Kawamura T, Awai T, Ochi A, Yamagami R, Tomikawa C, Hirata A. Microorganisms 6 (2018)
  4. Mechanism-based strategies for trapping and crystallizing complexes of RNA-modifying enzymes. Guelorget A, Golinelli-Pimpaneau B. Structure 19 282-291 (2011)
  5. Diverse Mechanisms of Sulfur Decoration in Bacterial tRNA and Their Cellular Functions. Zheng C, Black KA, Dos Santos PC. Biomolecules 7 (2017)
  6. Mechanisms of the tRNA wobble cytidine modification essential for AUA codon decoding in prokaryotes. Numata T. Biosci. Biotechnol. Biochem. 79 347-353 (2015)

Articles citing this publication (10)

  1. Crystallographic and mutational studies on the tRNA thiouridine synthetase TtuA. Nakagawa H, Kuratani M, Goto-Ito S, Ito T, Katsura K, Terada T, Shirouzu M, Sekine S, Shigi N, Yokoyama S. Proteins 81 1232-1244 (2013)
  2. Life without the essential bacterial tRNA Ile2-lysidine synthetase TilS: a case of tRNA gene recruitment in Bacillus subtilis. Fabret C, Dervyn E, Dalmais B, Guillot A, Marck C, Grosjean H, Noirot P. Mol. Microbiol. 80 1062-1074 (2011)
  3. Structural basis of tRNA agmatinylation essential for AUA codon decoding. Osawa T, Kimura S, Terasaka N, Inanaga H, Suzuki T, Numata T. Nat. Struct. Mol. Biol. 18 1275-1280 (2011)
  4. The catalytic flexibility of tRNAIle-lysidine synthetase can generate alternative tRNA substrates for isoleucyl-tRNA synthetase. Salowe SP, Wiltsie J, Hawkins JC, Sonatore LM. J. Biol. Chem. 284 9656-9662 (2009)
  5. Biochemical and structural characterization of oxygen-sensitive 2-thiouridine synthesis catalyzed by an iron-sulfur protein TtuA. Chen M, Asai SI, Narai S, Nambu S, Omura N, Sakaguchi Y, Suzuki T, Ikeda-Saito M, Watanabe K, Yao M, Shigi N, Tanaka Y. Proc. Natl. Acad. Sci. U.S.A. 114 4954-4959 (2017)
  6. Genomewide comparison and novel ncRNAs of Aquificales. Lechner M, Nickel AI, Wehner S, Riege K, Wieseke N, Beckmann BM, Hartmann RK, Marz M. BMC Genomics 15 522 (2014)
  7. Evidence for late resolution of the aux codon box in evolution. Jones TE, Ribas de Pouplana L, Alexander RW. J. Biol. Chem. 288 19625-19632 (2013)
  8. Cellular Concentrations of Nucleotide Diphosphate-Chelated Magnesium Ions Accelerate Catalysis by RNA and DNA Enzymes. Yamagami R, Huang R, Bevilacqua PC. Biochemistry 58 3971-3979 (2019)
  9. Discovery of ATP-Competitive Inhibitors of tRNAIle Lysidine Synthetase (TilS) by High-Throughput Screening. Shapiro AB, Plant H, Walsh J, Sylvester M, Hu J, Gao N, Livchak S, Tentarelli S, Thresher J. J Biomol Screen 19 1137-1146 (2014)
  10. Professor Tatsuo Miyazawa: from molecular structure to biological function. Kawai G, Yokoyama S. J. Biochem. 148 631-638 (2010)


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