› 2hu3

X-ray diffraction
1.3Å resolution

Parent Structure of Hen Egg White Lysozyme grown in acidic pH 4.8. Refinement for comparison with crosslinked molecules of lysozyme

Released:
DOI: 10.2210/pdb2hu3/pdb
PDB entry 2hu3 coloured by chain, front view.
PDB entry 2hu3 coloured by chain, side view.
PDB entry 2hu3 coloured by chain, top view.
Source organism: Gallus gallus
Entry authors: Frolow F, Lagziel-Simis S, Cohen-Hadar N, Wine Y, Freeman A

Function and Biology Details

Reaction catalysed: 
Hydrolysis of (1->4)-beta-linkages between N-acetylmuramic acid and N-acetyl-D-glucosamine residues in a peptidoglycan and between N-acetyl-D-glucosamine residues in chitodextrins
Biochemical function:
Biological process:
Cellular component:
Sequence domains:
Structure domain:

Structure analysis Details

Assemblies composition:
monomeric (preferred)
homo dimer
Assembly name:
PDBe Complex ID:
PDB-CPX-132831 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Lysozyme C Chain: A
Molecule details ›
Chain: A
Length: 129 amino acids
Theoretical weight: 14.33 KDa
Source organism: Gallus gallus
UniProt:
  • Canonical: P00698 (Residues: 19-147; Coverage: 100%)
Gene name: LYZ
Sequence domains: C-type lysozyme/alpha-lactalbumin family
Structure domains: Lysozyme

Ligands and Environments

4 bound ligands:
Ligand CL 12 x CL
Ligand NA 5 x NA
Ligand NH4 2 x NH4
Ligand EDO 5 x EDO
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: ESRF BEAMLINE ID29
Spacegroup: P43212
Unit cell:
a: 78.87Å b: 78.87Å c: 36.788Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.105 0.103 0.145

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