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Structural basis of target recognition by ATG8/LC3 during selective autophagy

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  1. Structure biology of selective autophagy receptors. Kim BW, Kwon DH, Song HK. BMB Rep 49 73-80 (2016)

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Reviews citing this publication (80)

  1. Regulation mechanisms and signaling pathways of autophagy. He C, Klionsky DJ. Annu. Rev. Genet. 43 67-93 (2009)
  2. Dynamics and diversity in autophagy mechanisms: lessons from yeast. Nakatogawa H, Suzuki K, Kamada Y, Ohsumi Y. Nat. Rev. Mol. Cell Biol. 10 458-467 (2009)
  3. Selective autophagy mediated by autophagic adapter proteins. Johansen T, Lamark T. Autophagy 7 279-296 (2011)
  4. A role for ubiquitin in selective autophagy. Kirkin V, McEwan DG, Novak I, Dikic I. Mol. Cell 34 259-269 (2009)
  5. Autophagy modulation as a potential therapeutic target for diverse diseases. Rubinsztein DC, Codogno P, Levine B. Nat Rev Drug Discov 11 709-730 (2012)
  6. Principles and current strategies for targeting autophagy for cancer treatment. Amaravadi RK, Lippincott-Schwartz J, Yin XM, Weiss WA, Takebe N, Timmer W, DiPaola RS, Lotze MT, White E. Clin. Cancer Res. 17 654-666 (2011)
  7. The regulation of autophagy - unanswered questions. Chen Y, Klionsky DJ. J. Cell. Sci. 124 161-170 (2011)
  8. Biogenesis and cargo selectivity of autophagosomes. Weidberg H, Shvets E, Elazar Z. Annu. Rev. Biochem. 80 125-156 (2011)
  9. Physiological significance of selective degradation of p62 by autophagy. Komatsu M, Ichimura Y. FEBS Lett. 584 1374-1378 (2010)
  10. Atg8-family interacting motif crucial for selective autophagy. Noda NN, Ohsumi Y, Inagaki F. FEBS Lett. 584 1379-1385 (2010)
  11. Atg8: an autophagy-related ubiquitin-like protein family. Shpilka T, Weidberg H, Pietrokovski S, Elazar Z. Genome Biol. 12 226 (2011)
  12. Autophagy: pathways for self-eating in plant cells. Liu Y, Bassham DC. Annu Rev Plant Biol 63 215-237 (2012)
  13. Autophagic processes in yeast: mechanism, machinery and regulation. Reggiori F, Klionsky DJ. Genetics 194 341-361 (2013)
  14. Ubiquitin-like proteins. van der Veen AG, Ploegh HL. Annu. Rev. Biochem. 81 323-357 (2012)
  15. The Cvt pathway as a model for selective autophagy. Lynch-Day MA, Klionsky DJ. FEBS Lett. 584 1359-1366 (2010)
  16. Mammalian Autophagy: How Does It Work? Bento CF, Renna M, Ghislat G, Puri C, Ashkenazi A, Vicinanza M, Menzies FM, Rubinsztein DC. Annu. Rev. Biochem. 85 685-713 (2016)
  17. Integration of clearance mechanisms: the proteasome and autophagy. Wong E, Cuervo AM. Cold Spring Harb Perspect Biol 2 a006734 (2010)
  18. Selective degradation of p62 by autophagy. Ichimura Y, Komatsu M. Semin Immunopathol 32 431-436 (2010)
  19. Dynamic regulation of macroautophagy by distinctive ubiquitin-like proteins. Klionsky DJ, Schulman BA. Nat. Struct. Mol. Biol. 21 336-345 (2014)
  20. Protein quality control and elimination of protein waste: the role of the ubiquitin-proteasome system. Amm I, Sommer T, Wolf DH. Biochim. Biophys. Acta 1843 182-196 (2014)
  21. Mitophagy programs: mechanisms and physiological implications of mitochondrial targeting by autophagy. Hamacher-Brady A, Brady NR. Cell. Mol. Life Sci. 73 775-795 (2016)
  22. Atomistic autophagy: the structures of cellular self-digestion. Hurley JH, Schulman BA. Cell 157 300-311 (2014)
  23. Cleaning House: Selective Autophagy of Organelles. Anding AL, Baehrecke EH. Dev. Cell 41 10-22 (2017)
  24. Mechanisms of Autophagy. Noda NN, Inagaki F. Annu Rev Biophys 44 101-122 (2015)
  25. Selective autophagy regulates various cellular functions. Komatsu M, Ichimura Y. Genes Cells 15 923-933 (2010)
  26. Molecular mechanism and physiological role of pexophagy. Manjithaya R, Nazarko TY, Farré JC, Subramani S. FEBS Lett. 584 1367-1373 (2010)
  27. Receptor-mediated mitophagy in yeast and mammalian systems. Liu L, Sakakibara K, Chen Q, Okamoto K. Cell Res. 24 787-795 (2014)
  28. Substrate recognition in selective autophagy and the ubiquitin-proteasome system. Schreiber A, Peter M. Biochim. Biophys. Acta 1843 163-181 (2014)
  29. The elimination of accumulated and aggregated proteins: a role for aggrephagy in neurodegeneration. Yamamoto A, Simonsen A. Neurobiol. Dis. 43 17-28 (2011)
  30. Cargo recognition and degradation by selective autophagy. Gatica D, Lahiri V, Klionsky DJ. Nat. Cell Biol. 20 233-242 (2018)
  31. Regulation of macroautophagy in Saccharomyces cerevisiae. Inoue Y, Klionsky DJ. Semin. Cell Dev. Biol. 21 664-670 (2010)
  32. Mechanistic insights into selective autophagy pathways: lessons from yeast. Farré JC, Subramani S. Nat. Rev. Mol. Cell Biol. 17 537-552 (2016)
  33. Role of melatonin in the regulation of autophagy and mitophagy: a review. Coto-Montes A, Boga JA, Rosales-Corral S, Fuentes-Broto L, Tan DX, Reiter RJ. Mol. Cell. Endocrinol. 361 12-23 (2012)
  34. The expanding universe of ubiquitin and ubiquitin-like modifiers. Vierstra RD. Plant Physiol. 160 2-14 (2012)
  35. Interaction domains of p62: a bridge between p62 and selective autophagy. Lin X, Li S, Zhao Y, Ma X, Zhang K, He X, Wang Z. DNA Cell Biol. 32 220-227 (2013)
  36. The role of ALFY in selective autophagy. Isakson P, Holland P, Simonsen A. Cell Death Differ. 20 12-20 (2013)
  37. Variations on a theme: plant autophagy in comparison to yeast and mammals. Avin-Wittenberg T, Honig A, Galili G. Protoplasma 249 285-299 (2012)
  38. Mitochondria autophagy in yeast. Kanki T, Klionsky DJ, Okamoto K. Antioxid. Redox Signal. 14 1989-2001 (2011)
  39. Selective autophagy. Svenning S, Johansen T. Essays Biochem. 55 79-92 (2013)
  40. The Interplay between Alpha-Synuclein Clearance and Spreading. Lopes da Fonseca T, Villar-Piqué A, Outeiro TF. Biomolecules 5 435-471 (2015)
  41. Pathophysiological role of autophagy: lesson from autophagy-deficient mouse models. Ichimura Y, Komatsu M. Exp. Anim. 60 329-345 (2011)
  42. Autophagy and lipids: tightening the knot. Rodriguez-Navarro JA, Cuervo AM. Semin Immunopathol 32 343-353 (2010)
  43. A systems biology viewpoint on autophagy in health and disease. Huett A, Goel G, Xavier RJ. Curr. Opin. Gastroenterol. 26 302-309 (2010)
  44. Structure and potential function of gamma-aminobutyrate type A receptor-associated protein. Mohrlüder J, Schwarten M, Willbold D. FEBS J. 276 4989-5005 (2009)
  45. How ubiquitination and autophagy participate in the regulation of the cell response to bacterial infection. Dupont N, Temime-Smaali N, Lafont F. Biol. Cell 102 621-634 (2010)
  46. The receptor proteins: pivotal roles in selective autophagy. Xu Z, Yang L, Xu S, Zhang Z, Cao Y. Acta Biochim. Biophys. Sin. (Shanghai) 47 571-580 (2015)
  47. The different roles of selective autophagic protein degradation in mammalian cells. Wang DW, Peng ZJ, Ren GF, Wang GX. Oncotarget 6 37098-37116 (2015)
  48. To deliver or to degrade - an interplay of the ubiquitin-proteasome system, autophagy and vesicular transport in plants. Zientara-Rytter K, Sirko A. FEBS J. 283 3534-3555 (2016)
  49. Autophagy Modulators in Cancer Therapy. Buzun K, Gornowicz A, Lesyk R, Bielawski K, Bielawska A. Int J Mol Sci 22 5804 (2021)
  50. History of the Selective Autophagy Research: How Did It Begin and Where Does It Stand Today? Kirkin V. J Mol Biol 432 3-27 (2020)
  51. Structure, Dynamics and Function of the 26S Proteasome. Mao Y. Subcell Biochem 96 1-151 (2021)
  52. Autophagy-regulating protease Atg4: structure, function, regulation and inhibition. Maruyama T, Noda NN. J. Antibiot. (2017)
  53. Autophagy: mechanisms, regulation, and its role in tumorigenesis. Parkhitko AA, Favorova OO, Henske EP. Biochemistry Mosc. 78 355-367 (2013)
  54. Selective autophagy of non-ubiquitylated targets in plants: looking for cognate receptor/adaptor proteins. Veljanovski V, Batoko H. Front Plant Sci 5 308 (2014)
  55. ATG8-Interacting Motif: Evolution and Function in Selective Autophagy of Targeting Biological Processes. Liu W, Liu Z, Mo Z, Guo S, Liu Y, Xie Q. Front Plant Sci 12 783881 (2021)
  56. Amyotrophic Lateral Sclerosis and Autophagy: Dysfunction and Therapeutic Targeting. Amin A, Perera ND, Beart PM, Turner BJ, Shabanpoor F. Cells 9 E2413 (2020)
  57. Emerging Mechanisms of Innate Immunity and Their Translational Potential in Inflammatory Bowel Disease. Corridoni D, Chapman T, Ambrose T, Simmons A. Front Med (Lausanne) 5 32 (2018)
  58. Autophagy in Traumatic Brain Injury: A New Target for Therapeutic Intervention. Zhang L, Wang H. Front Mol Neurosci 11 190 (2018)
  59. Autophagy in cancers including brain tumors: role of MicroRNAs. Pourhanifeh MH, Mahjoubin-Tehran M, Karimzadeh MR, Mirzaei HR, Razavi ZS, Sahebkar A, Hosseini N, Mirzaei H, Hamblin MR. Cell Commun Signal 18 88 (2020)
  60. ER-phagy and human diseases. Hübner CA, Dikic I. Cell Death Differ 27 833-842 (2020)
  61. Hepatic cytochromes P450: structural degrons and barcodes, posttranslational modifications and cellular adapters in the ERAD-endgame. Kim SM, Wang Y, Nabavi N, Liu Y, Correia MA. Drug Metab. Rev. 48 405-433 (2016)
  62. Mitophagy-driven metabolic switch reprograms stem cell fate. Naik PP, Birbrair A, Bhutia SK. Cell. Mol. Life Sci. 76 27-43 (2019)
  63. The role of autophagy in cardiovascular pathology. Gatica D, Chiong M, Lavandero S, Klionsky DJ. Cardiovasc Res 118 934-950 (2022)
  64. Activation and targeting of ATG8 protein lipidation. Martens S, Fracchiolla D. Cell Discov 6 23 (2020)
  65. Selective Autophagy by Close Encounters of the Ubiquitin Kind. Vainshtein A, Grumati P. Cells 9 E2349 (2020)
  66. Preserving Lysosomal Function in the Aging Brain: Insights from Neurodegeneration. Peng W, Minakaki G, Nguyen M, Krainc D. Neurotherapeutics 16 611-634 (2019)
  67. Structural Biology of the Cvt Pathway. Yamasaki A, Noda NN. J. Mol. Biol. 429 531-542 (2017)
  68. Ubiquitin-like modifiers. Taherbhoy AM, Schulman BA, Kaiser SE. Essays Biochem. 52 51-63 (2012)
  69. Atg8-Family Proteins-Structural Features and Molecular Interactions in Autophagy and Beyond. Wesch N, Kirkin V, Rogov VV. Cells 9 (2020)
  70. Dynamic Regulation of the 26S Proteasome: From Synthesis to Degradation. Marshall RS, Vierstra RD. Front Mol Biosci 6 40 (2019)
  71. Small but mighty: Atg8s and Rabs in membrane dynamics during autophagy. Barz S, Kriegenburg F, Sánchez-Martín P, Kraft C. Biochim Biophys Acta Mol Cell Res 1868 119064 (2021)
  72. Targeting autophagy in liver cancer. Di Fazio P, Matrood S. Transl Gastroenterol Hepatol 3 39 (2018)
  73. A brief overview of BNIP3L/NIX receptor-mediated mitophagy. Marinković M, Novak I. FEBS Open Bio 11 3230-3236 (2021)
  74. Is Disrupted Mitophagy a Central Player to Parkinson's Disease Pathology? Ko TK, Tan DJY. Cureus 15 e35458 (2023)
  75. Mechanisms and Pathophysiological Roles of the ATG8 Conjugation Machinery. Lystad AH, Simonsen A. Cells 8 (2019)
  76. Structure and Dynamics in the ATG8 Family From Experimental to Computational Techniques. Sora V, Kumar M, Maiani E, Lambrughi M, Tiberti M, Papaleo E. Front Cell Dev Biol 8 420 (2020)
  77. Canonical and non-canonical autophagy pathways in microglia. Jülg J, Strohm L, Behrends C. Mol Cell Biol MCB.00389-20 (2020)
  78. Drug discovery by targeting the protein-protein interactions involved in autophagy. Xiang H, Zhou M, Li Y, Zhou L, Wang R. Acta Pharm Sin B 13 4373-4390 (2023)
  79. Mechanisms Regulating the UPS-ALS Crosstalk: The Role of Proteaphagy. Quinet G, Gonzalez-Santamarta M, Louche C, Rodriguez MS. Molecules 25 (2020)
  80. Molecular Machinery of Lipid Droplet Degradation and Turnover in Plants. Qin Z, Wang T, Zhao Y, Ma C, Shao Q. Int J Mol Sci 24 16039 (2023)

Articles citing this publication (167)