› 2lzf

Solution NMR

Structure of the biofilm matrix promoter AbbA from B. subtilis

Released:
DOI: 10.2210/pdb2lzf/pdb
PDB entry 2lzf coloured by chain, ensemble of 20 models, front view.
PDB entry 2lzf coloured by chain, ensemble of 20 models, side view.
PDB entry 2lzf coloured by chain, ensemble of 20 models, top view.
Source organism: Bacillus subtilis subsp. subtilis str. 168
Primary publication:
A DNA mimic: the structure and mechanism of action for the anti-repressor protein AbbA.
Tucker AT, Bobay BG, Banse AV, Olson AL, Soderblom EJ, Moseley MA, Thompson RJ, Varney KM, Losick R, Cavanagh J
J Mol Biol 426 1911-24 (2014)
PMID: 24534728

Function and Biology Details

Biochemical function:
Biological process:
  • not assigned
Cellular component:
  • not assigned
Sequence domain:

Structure analysis Details

Assembly composition:
homo dimer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-128336 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Uncharacterized protein ykzF Chains: A, B
Molecule details ›
Chains: A, B
Length: 68 amino acids
Theoretical weight: 7.99 KDa
Source organism: Bacillus subtilis subsp. subtilis str. 168
Expression system: Escherichia coli BL21(DE3)
UniProt:
  • Canonical: O31697 (Residues: 1-65; Coverage: 100%)
Gene names: BSU14120, ykzF
Sequence domains: Antirepressor AbbA
Structure domains: Helix Hairpins

Ligands and Environments

No bound ligands
No modified residues

Experiments and Validation Details

Entry percentile scores
Chemical shift assignment: 41%
Refinement method: simulated annealing, molecular dynamics
Expression system: Escherichia coli BL21(DE3)

Quick links

Citations

3 review citations

Biofilm formation by Bacillus subtilis: new insights into regulatory strategies and assembly mechanisms.
Cairns et al. (2014)
2 more

1 mention without citation

A DNA mimic: the structure and mechanism of action for the anti-repressor protein AbbA.
Tucker et al. (2014)