› 2ozz

X-ray diffraction
2.3Å resolution

Crystal structure of YhfZ from Shigella flexneri

Released:
DOI: 10.2210/pdb2ozz/pdb
PDB entry 2ozz coloured by chain, front view.
PDB entry 2ozz coloured by chain, side view.
PDB entry 2ozz coloured by chain, top view.
Source organism: Shigella flexneri 2a
Entry authors: Kim Y, Borovilos M, Clancy S, Joachimiak A, Midwest Center for Structural Genomics (MCSG)

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned
Sequence domain:
Structure domain:

Structure analysis Details

Assembly composition:
monomeric (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-101524 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Hypothetical protein yhfZ Chains: A, B
Molecule details ›
Chains: A, B
Length: 231 amino acids
Theoretical weight: 26.04 KDa
Source organism: Shigella flexneri 2a
Expression system: Escherichia coli BL21(DE3)
UniProt:
  • Canonical: A0A0H2V277 (Residues: 1-228; Coverage: 100%)
Gene names: SF3401, yhfZ
Sequence domains: YhfZ C-terminal domain
Structure domains: Periplasmic binding protein-like II

Ligands and Environments

1 bound ligand:
Ligand SO4 4 x SO4
1 modified residue:
Ligand MSE 14 x MSE

Experiments and Validation Details

Entry percentile scores
X-ray source: APS BEAMLINE 19-ID
Spacegroup: P212121
Unit cell:
a: 47.27Å b: 62.55Å c: 170.192Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.229 0.222 0.288
Expression system: Escherichia coli BL21(DE3)

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