Function and Biology

Variant 1 of Ribonucleoprotein Core of the E. Coli Signal Recognition Particle

Source organism: Escherichia coli

EC 3.6.5.4: Signal-recognition-particle GTPase

Reaction catalysed:
GTP + H(2)O = GDP + phosphate
Systematic name:
GTP phosphohydrolase (protein-synthesis-assisting)

Sequence family

Pfam Protein family (Pfam)
PF02978
Domain description: Signal peptide binding domain
Occurring in:
  1. Signal recognition particle protein
The deposited structure of PDB entry 2pxd contains 1 copy of Pfam domain PF02978 (Signal peptide binding domain) in Signal recognition particle protein. Showing 1 copy in chain B [auth A].

InterPro InterPro annotations
IPR036891
Domain description: Signal recognition particle, SRP54 subunit, M-domain superfamily
Occurring in:
  1. Signal recognition particle protein
IPR022941
Domain description: Signal recognition particle, SRP54 subunit
Occurring in:
  1. Signal recognition particle protein
IPR004125
Domain description: Signal recognition particle, SRP54 subunit, M-domain
Occurring in:
  1. Signal recognition particle protein

Structure domain

CATH CATH domain
1.10.260.30
Class: Mainly Alpha
Architecture: Orthogonal Bundle
Topology: 434 Repressor (Amino-terminal Domain)
Homology: Signal recognition particle, SRP54 subunit, M-domain
Occurring in:
  1. Signal recognition particle protein
The deposited structure of PDB entry 2pxd contains 1 copy of CATH domain 1.10.260.30 (434 Repressor (Amino-terminal Domain)) in Signal recognition particle protein. Showing 1 copy in chain B [auth A].
SCOP SCOP annotation
47447
Class: All alpha proteins
Fold: Signal peptide-binding domain
Superfamily: Signal peptide-binding domain
Occurring in:
  1. Signal recognition particle protein
The deposited structure of PDB entry 2pxd contains 1 copy of SCOP domain 47447 (Signal peptide-binding domain) in Signal recognition particle protein. Showing 1 copy in chain B [auth A].