2vu5

X-ray diffraction
2Å resolution

Function and Biology Details

Reaction catalysed:
ATP + nucleoside diphosphate = ADP + nucleoside triphosphate
Biochemical function:
Cellular component:

Structure analysis Details

Assembly composition:
homo hexamer (preferred)
PDBe Complex ID:
PDB-CPX-182594 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Nucleoside diphosphate kinase Chain: A
Molecule details ›
Chain: A
Length: 148 amino acids
Theoretical weight: 16.65 KDa
Source organism: Bacillus anthracis
Expression system: Escherichia coli BL21
UniProt:
  • Canonical: Q81SV8 (Residues: 1-148; Coverage: 100%)
Gene names: BAS1425, BA_1536, GBAA_1536, ndk
Sequence domains: Nucleoside diphosphate kinase
Structure domains: Nucleoside diphosphate kinase-like domain

Ligands and Environments

No bound ligands
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: RIGAKU RU200
Spacegroup: P6322
Unit cell:
a: 107.531Å b: 107.531Å c: 52.301Å
α: 90° β: 90° γ: 120°
R-values:
R R work R free
0.177 0.173 0.223
Expression system: Escherichia coli BL21