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1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE

LMG model coordinates provided in the wwPDB chemical component dictionary
1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE in PDB entry 2wse, assembly 1, side view.
1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE in PDB entry 2wse, assembly 1, top view.
Formula: C45 H86 O10
Molecular weight: 787 Da

Environment details NEW

LMG 848 bound to chain B
Ligands and residuesInteractions
 hydrophobic
negatively charged
aromatic
polar
cystein
water
positively charged
other
glycine
bound molecule
glycans (SNFG)
aromatic
clashes
covalent
electrostatic
metal hydrophobic
vdw
TRP22PHE23ILE25ALA26THR27ASP30TYR68TRP70PHE381SER556TRP573PHE576GLN704LEU707LEU710VAL711ILE718CLA804CLA806CLA825CLA827CLA839PQN841

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The above 2D and 3D (Mol*) views of ligand interactions use quaternary structure derived from the PDB entry.
Please note:
  • Some chain IDs in the tooltip are followed by a number in square brackets. This number corresponds to the operation ID (mmCIF ‘oper_expression’) used to transform the chain.
  • The structure seen in Mol* (3D view) was protonated using ChimeraX.
  • Interactions were calculated using Arpeggio (see details for interaction types).
  • The colour scheme used is consistent with Clustal X.

Quick links

EBI resources (LMG)