2yp1

X-ray diffraction
2.31Å resolution

Crystallization of a 45 kDa peroxygenase- peroxidase from the mushroom Agrocybe aegerita and structure determination by SAD utilizing only the haem iron

Released:
Model geometry
Fit model/data

Function and Biology Details

Reaction catalysed:
RH + H(2)O(2) = ROH + H(2)O
Biochemical function:
Biological process:
Cellular component:
  • not assigned

Structure analysis Details

Assembly composition:
homo dimer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-110919 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecules (6 distinct):
Aromatic peroxygenase Chains: A, B, C, D
Molecule details ›
Chains: A, B, C, D
Length: 325 amino acids
Theoretical weight: 35.69 KDa
Source organism: Cyclocybe aegerita
UniProt:
  • Canonical: B9W4V6 (Residues: 47-371; Coverage: 92%)
Gene name: APO1
Sequence domains: Peroxidase, family 2
Structure domains: Chloroperoxidase-like

Ligands and Environments


Cofactor: Ligand HEM 4 x HEM
Carbohydrate polymer : NEW Components: NAG, BMA, MAN
Carbohydrate polymer : NEW Components: NAG, BMA, MAN
Carbohydrate polymer : NEW Components: NAG
Carbohydrate polymer : NEW Components: NAG, BMA, MAN
Carbohydrate polymer : NEW Components: NAG, BMA
No modified residues

Experiments and Validation Details

wwPDB Validation report is not available for this entry.
X-ray source: ESRF BEAMLINE ID23-1
Spacegroup: P21212
Unit cell:
a: 112.75Å b: 144.88Å c: 134.46Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.18 0.177 0.23