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Crystal structure of Cryptosporidium parvum adenylate kinase cgd5_3360

X-ray diffraction
1.6Å resolution
PDB entry 3be4 coloured by chain, front view.
PDB entry 3be4 coloured by chain, side view.
PDB entry 3be4 coloured by chain, top view.
Source organism: Cryptosporidium parvum Iowa II
Assembly composition:
monomeric (preferred)
Entry contents: 1 distinct polypeptide molecule

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Assemblies

Assembly 1 (preferred)
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Assembly Name: Adenylate kinase active site lid domain-containing protein
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Multimeric state: monomeric
Accessible surface area: 10087.18 Å2
Buried surface area: 2243.87 Å2
Dissociation area: 156.59 Å2
Dissociation energy (ΔGdiss): 0.53 kcal/mol
Dissociation entropy (TΔSdiss): 0.95 kcal/mol
Symmetry number: 1
PDBe Complex ID: PDB-CPX-176921
Monomeric assembly 1 of PDB entry 3be4 coloured by chemically distinct molecules, front view.
Monomeric assembly 1 of PDB entry 3be4 coloured by chemically distinct molecules, side view.
Monomeric assembly 1 of PDB entry 3be4 coloured by chemically distinct molecules, top view.
    Assembly 1
Confidence : 72%
No. subunits : 1
Symmetry : None
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3DComplex & QSbio predictionx
No. subunits : Unclear
Symmetry : Unclear
Evidence : This biological assembly agrees with the prediction of EPPIC but not of PISA

Macromolecules

Adenylate kinase active site lid domain-containing protein
Chain: A
Length: 217 amino acids
Theoretical weight: 23.86 KDa
Source organism: Cryptosporidium parvum Iowa II
Expression system: Escherichia coli
UniProt:
  • Canonical: Q5CRC5 (Residues: 4-219; Coverage: 98%)
Gene name: cgd5_3360
Pfam:
InterPro:
CATH: P-loop containing nucleotide triphosphate hydrolases
Adenylate kinase active site lid domain-containing protein in PDB entry 3be4, assembly 1, front view.
Adenylate kinase active site lid domain-containing protein in PDB entry 3be4, assembly 1, side view.
Adenylate kinase active site lid domain-containing protein in PDB entry 3be4, assembly 1, top view.
PDBe-KB: UniProt Coverage View: Q5CRC5  
121720406080100120140160180200
 
100200
UniProt
Q5CRC5
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Domains
Secondary structure
Flexibility predictions
Early folding residue predictions
Ligand binding sites
Sequence conservation
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