› 3djl

X-ray diffraction
1.7Å resolution

Crystal structure of alkylation response protein E. coli AidB

Released:
DOI: 10.2210/pdb3djl/pdb
PDB entry 3djl coloured by chain, front view.
PDB entry 3djl coloured by chain, side view.
PDB entry 3djl coloured by chain, top view.
Source organism: Escherichia coli
Primary publication:
Structure and DNA binding of alkylation response protein AidB.
Bowles T, Metz AH, O'Quin J, Wawrzak Z, Eichman BF
Proc Natl Acad Sci U S A 105 15299-304 (2008)
PMID: 18829440

Function and Biology Details

Biochemical function:
Biological process:
Cellular component:
Sequence domains:

Structure analysis Details

Assembly composition:
homo tetramer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-152563 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Putative acyl-CoA dehydrogenase AidB Chain: A
Molecule details ›
Chain: A
Length: 541 amino acids
Theoretical weight: 60.66 KDa
Source organism: Escherichia coli
Expression system: Escherichia coli
UniProt:
  • Canonical: P33224 (Residues: 1-541; Coverage: 100%)
Gene names: JW5867, aidB, b4187
Sequence domains:
Structure domains:

Ligands and Environments

2 bound ligands:
Ligand CA 1 x CA
Ligand FAD 1 x FAD
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: APS BEAMLINE 22-ID
Spacegroup: I222
Unit cell:
a: 84.989Å b: 101.875Å c: 137.566Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.162 0.161 0.179
Expression system: Escherichia coli

Quick links

Citations

3 review citations

DNA damage responses in prokaryotes: regulating gene expression, modulating growth patterns, and manipulating replication forks.
Kreuzer KN. (2013)
2 more

5 mentions without citation

Structure and DNA binding of alkylation response protein AidB.
Bowles et al. (2008)
4 more