› 3f3v

X-ray diffraction
2.6Å resolution

Kinase domain of cSrc in complex with inhibitor RL45 (Type II)

Released:
DOI: 10.2210/pdb3f3v/pdb
PDB entry 3f3v coloured by chain, front view.
PDB entry 3f3v coloured by chain, side view.
PDB entry 3f3v coloured by chain, top view.
Source organism: Gallus gallus
Primary publication:
Hybrid compound design to overcome the gatekeeper T338M mutation in cSrc.
Getlik M, Grütter C, Simard JR, Klüter S, Rabiller M, Rode HB, Robubi A, Rauh D
J Med Chem 52 3915-26 (2009)
PMID: 19462975

Function and Biology Details

Reaction catalysed: 
ATP + a [protein]-L-tyrosine = ADP + a [protein]-L-tyrosine phosphate
Biochemical function:
Biological process:
Cellular component:
  • not assigned
Sequence domains:

Structure analysis Details

Assembly composition:
monomeric (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-132629 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Proto-oncogene tyrosine-protein kinase Src Chains: A, B
Molecule details ›
Chains: A, B
Length: 286 amino acids
Theoretical weight: 32.74 KDa
Source organism: Gallus gallus
Expression system: Escherichia coli
UniProt:
  • Canonical: P00523 (Residues: 251-533; Coverage: 53%)
Gene name: SRC
Sequence domains: Protein tyrosine and serine/threonine kinase
Structure domains:

Ligands and Environments

1 bound ligand:
Ligand 1BU 2 x 1BU
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: SLS BEAMLINE X10SA
Spacegroup: P1
Unit cell:
a: 42.055Å b: 63.397Å c: 74.955Å
α: 79.06° β: 87.72° γ: 90.08°
R-values:
R R work R free
0.213 0.21 0.284
Expression system: Escherichia coli

Quick links

Citations

5 review citations

Src protein-tyrosine kinase structure, mechanism, and small molecule inhibitors.
Roskoski R. (2015)
4 more

3 mentions without citation

Three-Dimensional Interactions Analysis of the Anticancer Target c-Src Kinase with Its Inhibitors.
Jha et al. (2020)
2 more