› 3f8h

X-ray diffraction
2Å resolution

Crystal structure of a putative polyketide cyclase (tm1040_3560) from silicibacter sp. tm1040 at 2.00 A resolution

Released:
DOI: 10.2210/pdb3f8h/pdb
PDB entry 3f8h coloured by chain, front view.
PDB entry 3f8h coloured by chain, side view.
PDB entry 3f8h coloured by chain, top view.
Source organism: Ruegeria sp. TM1040
Entry author: Joint Center for Structural Genomics (JCSG)

Function and Biology Details

Biochemical function:
Biological process:
  • not assigned
Cellular component:
  • not assigned
Sequence domains:

Structure analysis Details

Assembly composition:
homo dimer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-172845 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
SnoaL-like domain-containing protein Chains: A, B
Molecule details ›
Chains: A, B
Length: 150 amino acids
Theoretical weight: 17.14 KDa
Source organism: Ruegeria sp. TM1040
Expression system: Escherichia coli
UniProt:
  • Canonical: Q1GLD7 (Residues: 1-131; Coverage: 100%)
Gene name: TM1040_3560
Sequence domains: SnoaL-like domain
Structure domains: Nuclear Transport Factor 2; Chain: A,

Ligands and Environments

4 bound ligands:
Ligand CA 1 x CA
Ligand MPD 1 x MPD
Ligand MRD 6 x MRD
Ligand ACT 2 x ACT
1 modified residue:
Ligand MSE 10 x MSE

Experiments and Validation Details

Entry percentile scores
X-ray source: APS BEAMLINE 23-ID-B
Spacegroup: P43212
Unit cell:
a: 63.31Å b: 63.31Å c: 196.09Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.169 0.167 0.213
Expression system: Escherichia coli

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