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Crystal structure of ColD H188K S187N

Source organism: Escherichia coli
Biochemical function: pyridoxal phosphate binding
Biological process: polysaccharide biosynthetic process
Cellular component: not assigned

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GO terms

Biochemical function:
Biological process:
Cellular component:
  • not assigned

Sequence family

Pfam Protein family (Pfam)
PF01041
Domain description: DegT/DnrJ/EryC1/StrS aminotransferase family
Occurring in:
  1. Pyridoxamine 5-phosphate-dependent dehydrase
The deposited structure of PDB entry 3gr9 contains 8 copies of Pfam domain PF01041 (DegT/DnrJ/EryC1/StrS aminotransferase family) in Pyridoxamine 5-phosphate-dependent dehydrase. Showing 1 copy in chain C.

InterPro InterPro annotations
IPR000653
Domain description: DegT/DnrJ/EryC1/StrS aminotransferase
Occurring in:
  1. Pyridoxamine 5-phosphate-dependent dehydrase
IPR015422
Domain description: Pyridoxal phosphate-dependent transferase, small domain
Occurring in:
  1. Pyridoxamine 5-phosphate-dependent dehydrase
IPR015424
Domain description: Pyridoxal phosphate-dependent transferase
Occurring in:
  1. Pyridoxamine 5-phosphate-dependent dehydrase
IPR015421
Domain description: Pyridoxal phosphate-dependent transferase, major domain
Occurring in:
  1. Pyridoxamine 5-phosphate-dependent dehydrase

Structure domains

CATH CATH domains
3.90.1150.10
Class: Alpha Beta
Architecture: Alpha-Beta Complex
Topology: Aspartate Aminotransferase, domain 1
Homology: Aspartate Aminotransferase, domain 1
Occurring in:
  1. Pyridoxamine 5-phosphate-dependent dehydrase
The deposited structure of PDB entry 3gr9 contains 8 copies of CATH domain 3.90.1150.10 (Aspartate Aminotransferase, domain 1) in Pyridoxamine 5-phosphate-dependent dehydrase. Showing 1 copy in chain C.
3.40.640.10
Class: Alpha Beta
Architecture: 3-Layer(aba) Sandwich
Topology: Aspartate Aminotransferase; domain 2
Homology: Type I PLP-dependent aspartate aminotransferase-like (Major domain)
Occurring in:
  1. Pyridoxamine 5-phosphate-dependent dehydrase
The deposited structure of PDB entry 3gr9 contains 8 copies of CATH domain 3.40.640.10 (Aspartate Aminotransferase; domain 2) in Pyridoxamine 5-phosphate-dependent dehydrase. Showing 1 copy in chain C.

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