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X-ray Structure of Hexameric HIV-1 CA

Source organisms:
Biochemical function: structural constituent of carboxysome shell
Biological process: viral process
Cellular component: carboxysome

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GO terms

Sequence families

Pfam Protein families (Pfam)
PF00936
Domain description: BMC domain
Occurring in:
  1. Capsid protein p24; Carboxysome shell protein CcmK4
The deposited structure of PDB entry 3gv2 contains 6 copies of Pfam domain PF00936 (BMC domain) in Capsid protein p24. Showing 1 copy in chain A (this domain is out of the observed residue ranges!).

PF19317
Domain description: Gag protein p24 C-terminal domain
Occurring in:
  1. Capsid protein p24; Carboxysome shell protein CcmK4
The deposited structure of PDB entry 3gv2 contains 6 copies of Pfam domain PF19317 (Gag protein p24 C-terminal domain) in Capsid protein p24. Showing 1 copy in chain A.

PF00607
Domain description: gag protein p24 N-terminal domain
Occurring in:
  1. Capsid protein p24; Carboxysome shell protein CcmK4
The deposited structure of PDB entry 3gv2 contains 6 copies of Pfam domain PF00607 (gag protein p24 N-terminal domain) in Capsid protein p24. Showing 1 copy in chain A.

InterPro InterPro annotations
IPR037233
Domain description: CcmK-like superfamily
Occurring in:
  1. Capsid protein p24; Carboxysome shell protein CcmK4
IPR000249
Domain description: Bacterial microcompartment domain
Occurring in:
  1. Capsid protein p24; Carboxysome shell protein CcmK4
IPR008919
Domain description: Retrovirus capsid, N-terminal
Occurring in:
  1. Capsid protein p24; Carboxysome shell protein CcmK4
IPR020808
Domain description: Bacterial microcompartments protein, conserved site
Occurring in:
  1. Capsid protein p24; Carboxysome shell protein CcmK4
IPR044872
Domain description: CcmK/CsoS1, bacterial microcompartment domain
Occurring in:
  1. Capsid protein p24; Carboxysome shell protein CcmK4
IPR046380
Domain description: Carboxysome shell protein CcmK
Occurring in:
  1. Capsid protein p24; Carboxysome shell protein CcmK4
IPR045345
Domain description: Retroviral nucleocapsid Gag protein p24, C-terminal domain
Occurring in:
  1. Capsid protein p24; Carboxysome shell protein CcmK4
IPR008916
Domain description: Retrovirus capsid, C-terminal
Occurring in:
  1. Capsid protein p24; Carboxysome shell protein CcmK4
IPR000721
Domain description: Retroviral nucleocapsid Gag protein p24, N-terminal
Occurring in:
  1. Capsid protein p24; Carboxysome shell protein CcmK4

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