› 3ip1

X-ray diffraction
2.09Å resolution

Structure of putative alcohol dehydrogenase (TM_042) from Thermotoga maritima

Released:
DOI: 10.2210/pdb3ip1/pdb
PDB entry 3ip1 coloured by chain, front view.
PDB entry 3ip1 coloured by chain, side view.
PDB entry 3ip1 coloured by chain, top view.
Source organism: Thermotoga maritima
Entry authors: Ramagopal UA, Toro R, Burley SK, Almo SC, New York SGX Research Center for Structural Genomics (NYSGXRC)

Function and Biology Details

Biochemical function:
Biological process:
Cellular component:
  • not assigned
Sequence domains:

Structure analysis Details

Assembly composition:
homo tetramer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-194524 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Scyllo-inosose 3-dehydrogenase Chains: A, B, C, D
Molecule details ›
Chains: A, B, C, D
Length: 404 amino acids
Theoretical weight: 44.83 KDa
Source organism: Thermotoga maritima
Expression system: Escherichia coli BL21(DE3)
UniProt:
  • Canonical: Q9WYP3 (Residues: 2-395; Coverage: 100%)
Gene names: TM_0412, iolM
Sequence domains:
Structure domains:

Ligands and Environments

3 bound ligands:
Ligand CD 8 x CD
Ligand CL 4 x CL
Ligand GOL 1 x GOL
1 modified residue:
Ligand MSE 32 x MSE

Experiments and Validation Details

Entry percentile scores
X-ray source: NSLS BEAMLINE X29A, APS BEAMLINE 24-ID-E
Spacegroup: P212121
Unit cell:
a: 81.365Å b: 131.555Å c: 161.559Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.209 0.207 0.248
Expression system: Escherichia coli BL21(DE3)

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