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3.1 Angstrom cryoEM structure of cytoplasmic polyhedrosis virus

Source organism: Bombyx mori cypovirus 1
Biochemical function: not assigned
Biological process: not assigned
Cellular component: viral inner capsid

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GO terms

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:

Sequence families

Pfam Protein families (Pfam)
PF20807
Domain description: Viral structural protein 5
Occurring in:
  1. Viral structural protein 5
The deposited structure of PDB entry 3izx contains 2 copies of Pfam domain PF20807 (Viral structural protein 5) in Viral structural protein 5. Showing 1 copy in chain D.

PF21416
Domain description: Inner layer core protein VP1-like, C-terminal
Occurring in:
  1. Capsid protein VP1
The deposited structure of PDB entry 3izx contains 2 copies of Pfam domain PF21416 (Inner layer core protein VP1-like, C-terminal) in Capsid protein VP1. Showing 1 copy in chain C.

PF20855
Domain description: CPV Capsid shell protein VP1, small protrusion domain
Occurring in:
  1. Capsid protein VP1
The deposited structure of PDB entry 3izx contains 2 copies of Pfam domain PF20855 (CPV Capsid shell protein VP1, small protrusion domain) in Capsid protein VP1. Showing 1 copy in chain C.

PF20830
Domain description: Reovirus turret protein, bridge domain
Occurring in:
  1. Structural protein VP3
The deposited structure of PDB entry 3izx contains 2 copies of Pfam domain PF20830 (Reovirus turret protein, bridge domain) in Structural protein VP3. Showing 2 copies in chain A.

PF20832
Domain description: Reovirus VP3 protein, Methyltransferase domain 2
Occurring in:
  1. Structural protein VP3
The deposited structure of PDB entry 3izx contains 1 copy of Pfam domain PF20832 (Reovirus VP3 protein, Methyltransferase domain 2) in Structural protein VP3. Showing 1 copy in chain A.

PF20831
Domain description: Reovirus VP3 protein, Methyltransferase domain 1
Occurring in:
  1. Structural protein VP3
The deposited structure of PDB entry 3izx contains 1 copy of Pfam domain PF20831 (Reovirus VP3 protein, Methyltransferase domain 1) in Structural protein VP3. Showing 1 copy in chain A.

PF20790
Domain description: Reovirus VP3 protein, guanylyltransferase (GTase)
Occurring in:
  1. Structural protein VP3
The deposited structure of PDB entry 3izx contains 1 copy of Pfam domain PF20790 (Reovirus VP3 protein, guanylyltransferase (GTase)) in Structural protein VP3. Showing 1 copy in chain A.

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