› 3l0q

X-ray diffraction
1.61Å resolution

The crystal structure of xlylulose kinase from Yersinia pseudotuberculosis

Released:
DOI: 10.2210/pdb3l0q/pdb
PDB entry 3l0q coloured by chain, front view.
PDB entry 3l0q coloured by chain, side view.
PDB entry 3l0q coloured by chain, top view.
Source organism: Yersinia pseudotuberculosis
Entry authors: Zhang Z, Burley SK, Swaminathan S, New York SGX Research Center for Structural Genomics (NYSGXRC)

Function and Biology Details

Biochemical function:
Biological process:
Cellular component:
Sequence domains:

Structure analysis Details

Assembly composition:
homo dimer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-179260 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Putative carbohydrate kinase Chains: A, B
Molecule details ›
Chains: A, B
Length: 554 amino acids
Theoretical weight: 61.84 KDa
Source organism: Yersinia pseudotuberculosis
Expression system: Escherichia coli BL21(DE3)
UniProt:
  • Canonical: Q665C6 (Residues: 2-544; Coverage: 100%)
Gene name: YPTB3592
Sequence domains:
Structure domains:

Ligands and Environments

3 bound ligands:
Ligand XUL 1 x XUL
Ligand EPE 1 x EPE
Ligand GOL 1 x GOL
1 modified residue:
Ligand MSE 50 x MSE

Experiments and Validation Details

Entry percentile scores
X-ray source: NSLS BEAMLINE X25
Spacegroup: P21
Unit cell:
a: 61.876Å b: 110.005Å c: 80.532Å
α: 90° β: 99.71° γ: 90°
R-values:
R R work R free
0.193 0.192 0.222
Expression system: Escherichia coli BL21(DE3)

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