› 3lm3

X-ray diffraction
1.44Å resolution

Crystal structure of a putative glycoside hydrolase/deacetylase (bdi_3119) from parabacteroides distasonis at 1.44 A resolution

Released:
DOI: 10.2210/pdb3lm3/pdb
PDB entry 3lm3 coloured by chain, front view.
PDB entry 3lm3 coloured by chain, side view.
PDB entry 3lm3 coloured by chain, top view.
Source organism: Parabacteroides distasonis ATCC 8503
Entry author: Joint Center for Structural Genomics (JCSG)

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned
Sequence domains:

Structure analysis Details

Assembly composition:
monomeric (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-107955 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
DUF3863 domain-containing protein Chain: A
Molecule details ›
Chain: A
Length: 449 amino acids
Theoretical weight: 52.57 KDa
Source organism: Parabacteroides distasonis ATCC 8503
Expression system: Escherichia coli
UniProt:
  • Canonical: A6LGL1 (Residues: 30-477; Coverage: 94%)
Gene name: BDI_3119
Sequence domains:
Structure domains:

Ligands and Environments

1 bound ligand:
Ligand PEG 3 x PEG
1 modified residue:
Ligand MSE 13 x MSE

Experiments and Validation Details

Entry percentile scores
X-ray source: SSRL BEAMLINE BL11-1
Spacegroup: P6122
Unit cell:
a: 124.359Å b: 124.359Å c: 103.746Å
α: 90° β: 90° γ: 120°
R-values:
R R work R free
0.142 0.141 0.16
Expression system: Escherichia coli

Quick links