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Crystal Structure of the 25kDa Subunit of Human Cleavage factor Im in complex with RNA UGUAAA

Source organism: Homo sapiens
Biochemical function: histone deacetylase binding
Biological process: positive regulation of pro-B cell differentiation
Cellular component: paraspeckles

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GO terms

Biochemical function:
Biological process:
Cellular component:

Sequence family

Pfam Protein family (Pfam)
PF13869
Domain description: Nucleotide hydrolase
Occurring in:
  1. Cleavage and polyadenylation specificity factor subunit 5
The deposited structure of PDB entry 3mdi contains 2 copies of Pfam domain PF13869 (Nucleotide hydrolase) in Cleavage and polyadenylation specificity factor subunit 5. Showing 1 copy in chain B.

InterPro InterPro annotations
IPR016706
Domain description: Cleavage/polyadenylation specificity factor subunit 5
Occurring in:
  1. Cleavage and polyadenylation specificity factor subunit 5
IPR015797
Domain description: NUDIX hydrolase-like domain superfamily
Occurring in:
  1. Cleavage and polyadenylation specificity factor subunit 5
IPR000086
Domain description: NUDIX hydrolase domain
Occurring in:
  1. Cleavage and polyadenylation specificity factor subunit 5

Structure domain

CATH CATH domain
3.90.79.10
Class: Alpha Beta
Architecture: Alpha-Beta Complex
Topology: Nucleoside Triphosphate Pyrophosphohydrolase
Homology: Nucleoside Triphosphate Pyrophosphohydrolase
Occurring in:
  1. Cleavage and polyadenylation specificity factor subunit 5
The deposited structure of PDB entry 3mdi contains 2 copies of CATH domain 3.90.79.10 (Nucleoside Triphosphate Pyrophosphohydrolase) in Cleavage and polyadenylation specificity factor subunit 5. Showing 1 copy in chain B.

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