› 3n3d

X-ray diffraction
2.4Å resolution

Crystal structure of geranylgeranyl pyrophosphate synthase from lactobacillus brevis atcc 367

Released:
DOI: 10.2210/pdb3n3d/pdb
PDB entry 3n3d coloured by chain, front view.
PDB entry 3n3d coloured by chain, side view.
PDB entry 3n3d coloured by chain, top view.
Source organism: Levilactobacillus brevis ATCC 367
Entry authors: Patskovsky Y, Toro R, Rutter M, Chang S, Sauder JM, Burley SK, Almo SC, New York Structural GenomiX Research Consortium (NYSGXRC), New York SGX Research Center for Structural Genomics (NYSGXRC)

Function and Biology Details

Biochemical function:
Biological process:
Cellular component:
  • not assigned
Sequence domains:

Structure analysis Details

Assembly composition:
homo dimer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-169974 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Geranylgeranyl pyrophosphate synthase Chains: A, B
Molecule details ›
Chains: A, B
Length: 335 amino acids
Theoretical weight: 37.83 KDa
Source organism: Levilactobacillus brevis ATCC 367
Expression system: Escherichia coli
UniProt:
  • Canonical: Q03Q08 (Residues: 2-325; Coverage: 100%)
Gene name: LVIS_1638
Sequence domains: Polyprenyl synthetase
Structure domains: Farnesyl Diphosphate Synthase

Ligands and Environments

1 bound ligand:
Ligand SO4 5 x SO4
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: NSLS BEAMLINE X29A
Spacegroup: P43212
Unit cell:
a: 111.562Å b: 111.562Å c: 198.497Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.235 0.234 0.267
Expression system: Escherichia coli

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