› 3o0l

X-ray diffraction
1.81Å resolution

Crystal structure of a Pfam DUF1425 family member (Shew_1734) from Shewanella sp. pv-4 at 1.81 a resolution

Released:
DOI: 10.2210/pdb3o0l/pdb
PDB entry 3o0l coloured by chain, front view.
PDB entry 3o0l coloured by chain, side view.
PDB entry 3o0l coloured by chain, top view.
Source organism: Shewanella loihica PV-4
Entry author: Joint Center for Structural Genomics (JCSG)

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned
Sequence domains:

Structure analysis Details

Assembly composition:
homo dimer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-107213 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
DUF1425 domain-containing protein Chains: A, B
Molecule details ›
Chains: A, B
Length: 112 amino acids
Theoretical weight: 12.32 KDa
Source organism: Shewanella loihica PV-4
Expression system: Escherichia coli
UniProt:
  • Canonical: A3QDQ3 (Residues: 19-129; Coverage: 100%)
Gene name: Shew_1734
Sequence domains: Protein of unknown function (DUF1425)
Structure domains: Immunoglobulin-like

Ligands and Environments

1 bound ligand:
Ligand EDO 3 x EDO
1 modified residue:
Ligand MSE 4 x MSE

Experiments and Validation Details

Entry percentile scores
X-ray source: SSRL BEAMLINE BL11-1
Spacegroup: P3121
Unit cell:
a: 62.633Å b: 62.633Å c: 119.04Å
α: 90° β: 90° γ: 120°
R-values:
R R work R free
0.205 0.204 0.228
Expression system: Escherichia coli

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