› 3owr

X-ray diffraction
1.81Å resolution

Crystal structure of a putative secreted protein (BF4250) from Bacteroides fragilis NCTC 9343 at 1.81 A resolution

Released:
DOI: 10.2210/pdb3owr/pdb
PDB entry 3owr coloured by chain, front view.
PDB entry 3owr coloured by chain, side view.
PDB entry 3owr coloured by chain, top view.
Source organism: Bacteroides fragilis NCTC 9343
Entry author: Joint Center for Structural Genomics (JCSG)

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned

Structure analysis Details

Assembly composition:
monomeric (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-177438 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Lipoprotein Chains: A, B, C, D
Molecule details ›
Chains: A, B, C, D
Length: 134 amino acids
Theoretical weight: 14.6 KDa
Source organism: Bacteroides fragilis NCTC 9343
Expression system: Escherichia coli
UniProt:
  • Canonical: Q5L7M9 (Residues: 27-159; Coverage: 84%)
Gene names: BF9343_4140, NCTC9343_01525
Sequence domains: DUF5018-related
Structure domains: Immunoglobulin-like

Ligands and Environments

3 bound ligands:
Ligand PEG 2 x PEG
Ligand PO4 4 x PO4
Ligand PG4 1 x PG4
1 modified residue:
Ligand MSE 4 x MSE

Experiments and Validation Details

Entry percentile scores
X-ray source: SSRL BEAMLINE BL9-2
Spacegroup: P4
Unit cell:
a: 103.967Å b: 103.967Å c: 59.866Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.168 0.166 0.202
Expression system: Escherichia coli

Quick links