› 3qkc

X-ray diffraction
2.2Å resolution

CRYSTAL STRUCTURE OF geranyl diphosphate synthase small subunit from Antirrhinum majus

Released:
DOI: 10.2210/pdb3qkc/pdb
PDB entry 3qkc coloured by chain, front view.
PDB entry 3qkc coloured by chain, side view.
PDB entry 3qkc coloured by chain, top view.
Source organism: Antirrhinum majus
Entry authors: Malashkevich VN, Toro R, Sauder JM, Burley SK, Almo SC, New York SGX Research Center for Structural Genomics (NYSGXRC)

Function and Biology Details

Reaction catalysed: 
Prenyl diphosphate + isopentenyl diphosphate = diphosphate + geranyl diphosphate
Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned
Sequence domain:

Structure analysis Details

Assembly composition:
homo dimer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-180277 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Geranyl diphosphate synthase small subunit Chains: A, B
Molecule details ›
Chains: A, B
Length: 273 amino acids
Theoretical weight: 30 KDa
Source organism: Antirrhinum majus
Expression system: Escherichia coli BL21(DE3)
UniProt:
  • Canonical: Q6QLV2 (Residues: 36-297; Coverage: 88%)
Structure domains: Farnesyl Diphosphate Synthase

Ligands and Environments

No bound ligands
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: NSLS BEAMLINE X29A
Spacegroup: P1
Unit cell:
a: 43.199Å b: 48.789Å c: 61.593Å
α: 66.69° β: 89.28° γ: 89.98°
R-values:
R R work R free
0.213 0.209 0.289
Expression system: Escherichia coli BL21(DE3)

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