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Crystal Structure of the E. coli adaptive response protein AidB in the space group P3(2)

Source organism: Escherichia coli K-12
Biochemical function: sequence-specific DNA binding
Biological process: negative regulation of DNA-templated transcription
Cellular component: cytoplasm

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GO terms

Sequence families

Pfam Protein families (Pfam)
PF22924
Domain description: Acyl-CoA oxidase, C-alpha1 domain
Occurring in:
  1. Putative acyl-CoA dehydrogenase AidB

PF08028
Domain description: Acyl-CoA dehydrogenase, C-terminal domain
Occurring in:
  1. Putative acyl-CoA dehydrogenase AidB

PF00441
Domain description: Acyl-CoA dehydrogenase, C-terminal domain
Occurring in:
  1. Putative acyl-CoA dehydrogenase AidB
The deposited structure of PDB entry 3u33 contains 12 copies of Pfam domain PF00441 (Acyl-CoA dehydrogenase, C-terminal domain) in Putative acyl-CoA dehydrogenase AidB. Showing 1 copy in chain A.

PF02770
Domain description: Acyl-CoA dehydrogenase, middle domain
Occurring in:
  1. Putative acyl-CoA dehydrogenase AidB
The deposited structure of PDB entry 3u33 contains 12 copies of Pfam domain PF02770 (Acyl-CoA dehydrogenase, middle domain) in Putative acyl-CoA dehydrogenase AidB. Showing 1 copy in chain A.

PF18158
Domain description: Adaptive response protein AidB N-terminal domain
Occurring in:
  1. Putative acyl-CoA dehydrogenase AidB
The deposited structure of PDB entry 3u33 contains 12 copies of Pfam domain PF18158 (Adaptive response protein AidB N-terminal domain) in Putative acyl-CoA dehydrogenase AidB. Showing 1 copy in chain A.

InterPro InterPro annotations
IPR006089
Domain description: Acyl-CoA dehydrogenase, conserved site
Occurring in:
  1. Putative acyl-CoA dehydrogenase AidB
IPR036250
Domain description: Acyl-CoA dehydrogenase-like, C-terminal
Occurring in:
  1. Putative acyl-CoA dehydrogenase AidB
IPR009075
Domain description: Acyl-CoA dehydrogenase/oxidase, C-terminal
Occurring in:
  1. Putative acyl-CoA dehydrogenase AidB
IPR006091
Domain description: Acyl-CoA oxidase/dehydrogenase, middle domain
Occurring in:
  1. Putative acyl-CoA dehydrogenase AidB
IPR009100
Domain description: Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily
Occurring in:
  1. Putative acyl-CoA dehydrogenase AidB
IPR034184
Domain description: Putative acyl-CoA dehydrogenase AidB
Occurring in:
  1. Putative acyl-CoA dehydrogenase AidB
IPR041504
Domain description: Adaptive response protein AidB, N-terminal
Occurring in:
  1. Putative acyl-CoA dehydrogenase AidB

Structure domains

CATH CATH domains
2.40.110.20
Class: Mainly Beta
Architecture: Beta Barrel
Topology: Butyryl-CoA Dehydrogenase, subunit A; domain 2
Homology: Butyryl-CoA Dehydrogenase, subunit A; domain 2
Occurring in:
  1. Putative acyl-CoA dehydrogenase AidB
The deposited structure of PDB entry 3u33 contains 12 copies of CATH domain 2.40.110.20 (Butyryl-CoA Dehydrogenase, subunit A; domain 2) in Putative acyl-CoA dehydrogenase AidB. Showing 1 copy in chain A.
6.10.250.600
Class: Special
Architecture: Helix non-globular
Topology: Single alpha-helices involved in coiled-coils or other helix-helix interfaces
Homology: Single alpha-helices involved in coiled-coils or other helix-helix interfaces
Occurring in:
  1. Putative acyl-CoA dehydrogenase AidB
The deposited structure of PDB entry 3u33 contains 12 copies of CATH domain 6.10.250.600 (Single alpha-helices involved in coiled-coils or other helix-helix interfaces) in Putative acyl-CoA dehydrogenase AidB. Showing 1 copy in chain A.

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